FMO11328.5prime Sequence
398 bp (398 high quality bases) assembled on 2011-12-09
> FMO11328.5prime
CAGTCGACATGCTTTTCTTCAATCGATGGGGCAAGATCCGGATGCTGGAG
CCGTATCAGCCCAAGTTCCAGCAGCAGCATCGCAGTTCCTGTCCGCTGGT
CGATTTGGATGCTGTTACCACGCACCAGCGCTCCTCCGTGTCGCGCATGT
CGATGGGCATGGTGCACAATCTCAATATGCCGACGTGTCAATTTGCGGCC
TATAATCCCAACATTTATGCCAAGGGTTACGCCTCGCATGTTTCGGCGTC
GCGTCCCCGCCAGAATTCGGTGTTTGTTGGGGCCAGTACCAGTCACTATT
TGATGCCAAGACCACCGAGGAAGACCCGATCGGCGATGGACCTGCACTCG
ATGGTGCTGGACGAGAGTGCCGAACAGGTGGCAAGCTTTCTAGACCAT
FMO11328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12541-RE | 2529 | CG12541-RE | 826..1197 | 9..380 | 1860 | 100 | Plus |
| CG12541-RD | 1752 | CG12541-RD | 826..1197 | 9..380 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7022940..7023095 | 380..225 | 780 | 100 | Minus |
| X | 23542271 | X | 7032093..7032212 | 128..9 | 600 | 100 | Minus |
| X | 23542271 | X | 7031833..7031934 | 227..126 | 510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 641..693 | 81..29 | 103 | 66 | Minus |
FMO11328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:48 Download gff for
FMO11328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12541-RC | 1079..1450 | 9..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:43 Download gff for
FMO11328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12541-RD | 826..1197 | 9..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:55 Download gff for
FMO11328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12541-RD | 826..1197 | 9..380 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:55 Download gff for
FMO11328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7032093..7032212 | 9..128 | 100 | | Minus |
| X | 7022940..7023094 | 226..380 | 100 | <- | Minus |
| X | 7031835..7031931 | 129..225 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:43 Download gff for
FMO11328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6926126..6926245 | 9..128 | 100 | | Minus |
| arm_X | 6916973..6917127 | 226..380 | 100 | <- | Minus |
| arm_X | 6925868..6925964 | 129..225 | 100 | <- | Minus |
