FMO11333.5prime Sequence
404 bp (404 high quality bases) assembled on 2011-12-09
> FMO11333.5prime
CAGTCGACATGATTAGATCCTGTCGAGCTCTGATCTCCCAGTGCGGATTA
CACCTAAGACGATGTTCTCTTGCAAAGGCAGCAAGTAATTTGAAAAAAGA
TGATGTCGAAGAAATGGAAACACCAGCGAATAGACAGAGGGTTGAGCTGC
CACCGAATCCCGAGGAAAAACTAAGTAAGCGCTATCTTGCGTTCCGGGAA
AAGCTGCGATCGGAGGCGCCGCTAGAACCACTGCCCGAGTGTGCACCACA
TCCGGCCCACGAAAAGGAGCCACTTAAACCGTGGCCCAATAATACCAATC
CGTATACCGGGGAAATCGGTGGACAAGCGGGACCAGAACCCACGCGCTAT
GGCGACTGGGAGCGCAAGGGACGAGTCACGGATTTCGCAAGCTTTCTAGA
CCAT
FMO11333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15283-RB | 641 | CG15283-RB | 63..440 | 9..386 | 1890 | 100 | Plus |
Sirup-RC | 727 | CG7224-RC | 460..598 | 248..386 | 335 | 82.7 | Plus |
Sirup-RA | 650 | CG7224-RA | 383..521 | 248..386 | 335 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14450483..14450860 | 386..9 | 1890 | 100 | Minus |
2L | 23513712 | 2L | 7999409..7999547 | 248..386 | 335 | 82.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:43:38 has no hits.
FMO11333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:20 Download gff for
FMO11333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..445 | 9..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:27 Download gff for
FMO11333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..445 | 9..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:44 Download gff for
FMO11333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..445 | 9..392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:44 Download gff for
FMO11333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14450478..14450860 | 9..392 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:27 Download gff for
FMO11333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14450478..14450860 | 9..392 | 99 | | Minus |