Clone FMO11337 Report

Search the DGRC for FMO11337

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:113
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15256-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11337.5prime Sequence

464 bp (464 high quality bases) assembled on 2011-12-09

> FMO11337.5prime
CAGTCGACATGGCCTGCAAAAAGAAAACCAAACTGTGGGAACCAATGACC
AAGGATGAATTGAAGTCCACCACACAGGCGATGCTCGAGGAGGGCGCCAG
GGGTTTAAGGACGATTTCTACGCAGCAGAAAAAGCTGGTCAACTTTCAGT
CGTTCAACATGGATGATCCCCGTTACGGCATTTCCCTAATCGAGGACAAC
ATGGAACCGCCCATGTTGTCGAGCTACACAAGGCAATACTCCCAGCCGTA
TCCAAATCGTTGTAAGCCCTTTGTTCAAAAGACGGAAACACCAGATCCCA
TATTCAATCGAAGGCCGAAAAACGATTTTGAGTTTACCACAGGACTGGAT
TTTAAGTTTCTTGATGATCACATGCACAATCTTTCCGAATCACGCAAGAA
AGTCAACTTCTTCCGGCAACTGAGGAATCAATCATTTCTTCTGTATGCAA
GCTTTCTAGACCAT

FMO11337.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15256-RC 1449 CG15256-RC 93..538 1..446 2200 99.6 Plus
CG15256-RB 784 CG15256-RB 93..538 1..446 2200 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15550781..15551039 167..425 1295 100 Plus
2L 23513712 2L 15550464..15550629 1..166 800 98.8 Plus
Blast to na_te.dros performed on 2014-11-27 00:44:05 has no hits.

FMO11337.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:22 Download gff for FMO11337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 14..469 1..454 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:47 Download gff for FMO11337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 93..548 1..454 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:00 Download gff for FMO11337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 93..548 1..454 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:00 Download gff for FMO11337.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15550464..15550629 1..166 98 -> Plus
2L 15550781..15551038 167..424 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:47 Download gff for FMO11337.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15550464..15550629 1..166 98 -> Plus
arm_2L 15550781..15551038 167..424 100 -> Plus