FMO11341.5prime Sequence
1047 bp (990 high quality bases) assembled on 2011-12-09
> FMO11341.5prime
CAGTCGACATGGCCCATACCATCAAGTTGGACTGGATTAGGAGGATCCTG
AATCTTTGCGGCTCTCGACAATGTCGCCTAATGCATGATGATGCTGAGGC
GCGGATCCGCACGCAGAGTCCCTGGAGACACCTGATGCGATTGACCAGGA
ATAACTCGAGCAGTACTTCCGGTGGCAATGAACCCCGCAGACAGGACCCA
AATAAACCGAAGCCGAATAGCAAGCAAATCTCATACACCGAACGGCAAAC
ACCTTTTAGGATCAACACACATCCAAATGCTTACCTAGTAGGTATGCATC
CTTTGGTCAGAGAGCGGGACAAAAGGACGAAGAGGCATAAGCGACGCCTT
CCATTTGAAAAGTCAGCAACATTGAGGTTACACAATGCGCAGCGAAGAGA
GGAGCAGCTGGCGAGGACCATGCTATCCCAGGATTGCAGTGGCCCTCACT
CATCCAGCCATACCGCCATACCGCTTAAGATTCTTCAAATGACGCAAAGG
GATCGTATGATGTCCTCGCAGCTGGTAATTGATGCGATGAGGACCAGGAA
TATGGAGAGAATGGTGCGCAAATCGGAGGCCAGGATGTTGAACGAGCGGG
TCAAGAAGCTCCTGGAGAAACAGAAAGAATCAAAGTTAGAAGGGAAGAAG
CAGCAGTCGGATGATGACTCCACTGTTCCCGATCCAAAGATCATGGGGCC
GGAACAGCGGCCACTGGAGGTCCAGGCGGTGGTGCAATTGCTAAAGAAAG
CCATTTCCCTGGTCCATTTCGGTCACGAGAATCCCCCGAAGGTGGTGAAG
GATGTAAGGATCTCCAGGATGCAGACCAAACTGGACATAGATGGCCTGCA
TCCTTGCGGCAGCTTCATTGAATTCTTTTGCCAACACTGACAGCCGCAGT
CAATCCAAAGCCTATCACATGCGCATTCGCTGCACCAAGAGTCCAATATC
GGAAATCCAATCAAATCCAACTCTCACAAATAGCCGTCAGTCTTGATGAT
GAAGAGCAAAGGCGCCTGGATCGATTGAAGAGCGAAAAAGGGTGCAA
FMO11341.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15196-RB | 1587 | CG15196-RB | 108..1145 | 9..1047 | 4885 | 98.5 | Plus |
CG15196-RC | 1578 | CG15196-RC | 108..1136 | 9..1047 | 4740 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11410458..11411208 | 279..1028 | 3350 | 97.9 | Plus |
X | 23542271 | X | 11410199..11410393 | 85..279 | 975 | 100 | Plus |
X | 23542271 | X | 11410054..11410129 | 9..84 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:44:29 has no hits.
FMO11341.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:25 Download gff for
FMO11341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15196-RB | 99..1143 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:03 Download gff for
FMO11341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15196-RB | 99..1143 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:15 Download gff for
FMO11341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15196-RB | 99..1143 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:15 Download gff for
FMO11341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11410045..11410129 | 1..84 | 96 | -> | Plus |
X | 11410199..11410393 | 85..279 | 100 | -> | Plus |
X | 11410459..11411223 | 280..1045 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:03 Download gff for
FMO11341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11304078..11304162 | 1..84 | 96 | -> | Plus |
arm_X | 11304232..11304426 | 85..279 | 100 | -> | Plus |
arm_X | 11304492..11305256 | 280..1045 | 97 | | Plus |