FMO11346.5prime Sequence
816 bp (816 high quality bases) assembled on 2011-12-09
> FMO11346.5prime
CAGTCGACATGGCACAGGAGTACAGTGTGCAGTTAACCTTCCGTGAACAG
TGGACGGATGAACGCCTCAAGTTCGACGATATCCAGGGTCGCCTAAAGTA
TCTGACCCTGACGGAGGCGAACCGCGTGTGGATGCCCGATCTTTTCTTCT
CGAACGAGAAGGAGGGACACTTCCACAACATCATCATGCCCAATGTGTAT
ATTCGCATCTTCCCCAACGGATCTGTGCTATATAGTATACGTATCTCGCT
GACATTGGCCTGCCCAATGAACCTAAAGCTGTATCCGCTGGATAGACAGA
TCTGCTCACTACGGATGGCCAGCTATGGCTGGACCACCAACGACTTGGTC
TTCCTGTGGAAGGAGGGCGATCCCGTACAGGTGGTAAAGAACTTACACCT
ACCTCGCTTCACACTGGAGAAGTTTCTGACTGATTACTGTAACAGTAAAA
CCAACACCGGTGAATACAGTTGCCTCAAAGTCGATCTACTATTCAAGCGA
GAATTCTCATATTACTTAATACAAATTTATATACCATGCTGTATGTTGGT
CATTGTATCATGGGTATCATTCTGGCTGGATCAAGGAGCAGTACCGGCGC
GAGTGTCACTGGGTGTCACCACCCTGCTGACCATGGCCACCCAGACGTCG
GGCATAAACGCCTCCCTGCCGCCCGTTTCCTATACGAAGGCCATCGATGT
GTGGACAGGCGTGTGTCTGACGTTCGTGTTCGGGGCCCTGCTCGAGTTCG
CCCTGATGAACTATGCATCCCGATCAAGTTCGAATAAGCTAGTAATGCAA
GCTTTTCTTAGACAAT
FMO11346.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GluClalpha-RE | 1650 | CG7535-RE | 821..1609 | 9..796 | 3890 | 99.6 | Plus |
GluClalpha-RP | 2548 | CG7535-RP | 897..1667 | 17..787 | 3825 | 99.7 | Plus |
GluClalpha-RN | 2569 | CG7535-RN | 897..1667 | 17..787 | 3825 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19760394..19760631 | 87..324 | 1190 | 100 | Plus |
3R | 32079331 | 3R | 19764248..19764423 | 612..787 | 850 | 98.9 | Plus |
3R | 32079331 | 3R | 19763597..19763752 | 459..614 | 780 | 100 | Plus |
3R | 32079331 | 3R | 19760900..19761036 | 325..461 | 685 | 100 | Plus |
3R | 32079331 | 3R | 19760260..19760336 | 13..89 | 385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:43:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7002..7043 | 153..194 | 111 | 73.8 | Plus |
FMO11346.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:20 Download gff for
FMO11346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GluClalpha-RE | 577..1374 | 9..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:31 Download gff for
FMO11346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GluClalpha-RE | 577..1374 | 9..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:47 Download gff for
FMO11346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GluClalpha-RE | 821..1618 | 9..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:47 Download gff for
FMO11346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19764249..19764442 | 613..806 | 96 | | Plus |
3R | 19760253..19760334 | 5..87 | 96 | -> | Plus |
3R | 19760395..19760631 | 88..324 | 100 | -> | Plus |
3R | 19760900..19761034 | 325..459 | 100 | -> | Plus |
3R | 19763598..19763750 | 460..612 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:31 Download gff for
FMO11346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15585975..15586056 | 5..87 | 96 | -> | Plus |
arm_3R | 15586117..15586353 | 88..324 | 100 | -> | Plus |
arm_3R | 15586622..15586756 | 325..459 | 100 | -> | Plus |
arm_3R | 15589320..15589472 | 460..612 | 100 | -> | Plus |
arm_3R | 15589971..15590164 | 613..806 | 96 | | Plus |