FMO11347.5prime Sequence
560 bp (560 high quality bases) assembled on 2011-12-09
> FMO11347.5prime
CAGTCGACATGAAAGGTTTTCAGATAATCGGATTACTTGGATTGTTTGCA
CTCCTTGTAAGTGGATCGACCTCGTCTGGAGAAGATACCAACATCAAACT
AACAACAGACGAATCTACTACTGTGGAGGATACCACGGAGGTTTTAGTCA
CAACACTACCACCTCCAGTCCTGTGTGCTGATGAAGATCTGTTTCTCCCA
GCACCCGACTGCAGAGAGTATTATCAATGCCTGTACGGTGAGGGAATTTT
AAAGATATGTCCAGACGGCCTCTATTGGGATCGGGAGCTGAATGTTTGCG
CCTGGGACTCACAGCATTGTGCTGATGACAAGAACGAGACCACCACACCA
TCGACCTTGAATTGCGCATCCGGGTTACCATTTTTGCCCTATATACCGGA
CTGCACTAAGTTTATCCAGTGCGTCTACAATATTGGCTTTAAACTAAGCT
GCCCGAGTGGTTTGTATTGGAACCAACCTCTTCAATCGTGTGACTATACC
TGCGATAATGCGATTGAGTTCTCTGGCGCACACCAAGTGCAAGCAAGCTT
TCTAGACCAT
FMO11347.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42397-RA | 651 | CG42397-RA | 35..570 | 7..542 | 2680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11973166..11973695 | 542..13 | 2650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:43:52 has no hits.
FMO11347.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:21 Download gff for
FMO11347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:36 Download gff for
FMO11347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:51 Download gff for
FMO11347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:51 Download gff for
FMO11347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11973163..11973695 | 13..546 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:36 Download gff for
FMO11347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11966263..11966795 | 13..546 | 99 | | Minus |