FMO11348.5prime Sequence
453 bp (453 high quality bases) assembled on 2011-12-09
> FMO11348.5prime
CAGTCGACATGGAATCACTCGCAAAATATCGATACAGTTTGGTGGCTGGC
TCCTTCGCAGCTGCAGGAAGCTTTTTCGGAAAACTTCCCAGCCACCTGAG
CGCCCAAAAACTACTGAATACTTCGCAAATAAATGAAGACTTTTCTTATT
TAGAAATAGCATTACTTCAGCTGCTGCCACTAGTGTTAATGGTAACATGC
AACGTTTGCAACTTGCGTTTCTTTTTGAAGGCCCTGCAAATGACTGAACA
AACTTTAACGTGCGTCGTTTTAACTGCCGCTTCGAATTATGTCTTATCGT
TTGTCCTAGGTGCGCTTGTTTATCGGGAGCCACTGACAGTACTATCTGGC
ATCGGAATAACTCTCATTCTGGCTGGTCTTTGGTTTCTTTGCGACGGAGG
AACAGTCGAGTCCGAAAAGCAGGACAAAATGGAAGCAAGCTTTCTATTTT
TTT
FMO11348.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42495-RA | 654 | CG42495-RA | 75..500 | 9..434 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18667644..18667793 | 150..299 | 750 | 100 | Plus |
3L | 28110227 | 3L | 18667435..18667579 | 9..153 | 725 | 100 | Plus |
3L | 28110227 | 3L | 18667842..18667981 | 295..434 | 685 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:43:58 has no hits.
FMO11348.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:22 Download gff for
FMO11348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 9..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:43 Download gff for
FMO11348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 9..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:55 Download gff for
FMO11348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42495-RA | 75..500 | 9..434 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:55 Download gff for
FMO11348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18667435..18667579 | 9..153 | 100 | -> | Plus |
3L | 18667648..18667793 | 154..299 | 100 | -> | Plus |
3L | 18667847..18667983 | 300..438 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:43 Download gff for
FMO11348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18660535..18660679 | 9..153 | 100 | -> | Plus |
arm_3L | 18660748..18660893 | 154..299 | 100 | -> | Plus |
arm_3L | 18660947..18661083 | 300..438 | 97 | -> | Plus |