FMO11353.5prime Sequence
528 bp (342 high quality bases) assembled on 2011-12-09
> FMO11353.5prime
CAGTCGACATGTGGCGCCATCGCCACCTGGCCACTATCCTCCTGCTGGCG
GTGTGCGTTTCCCAAGGATCTGGATTAGCCTTGGACCAACCCGAAGGACG
CGTTGTGGGTGGAAAAGCGGCGGCGGCCAATAGTGCTCCGTATATAGTGT
CCATGCAGTACGGAGGAACTCACTATTGCGCCGCTAACATCATTAATTCC
AACTGGCTGGTAACGGCTGCTCACTGCCTGGCCAATAGGAATCAAGTACT
TGGAAGCACCCTGGTGGCTGGAAGCATTGCGGTGGCCGGGAACAGCGAGC
ACAACACAGAAGAGGCAAACCCCCACTATGTGATCATGATCTTAATCCGG
CGGAACTGTGCCTATGACTCGATTTGTTTTCCGCCCCCCGCCTTCCTTGG
ACCGTGCAGTGGCCCGGGGAACCTGCCACCTCCGGGGTGGGGCAATGGAA
AGGTAACTCTTTGGTGGGGGAAAAAAAAAAAACAAAACCCCCCAATCCAA
ACCCCCCAGAGGGAAAAAAAACCCATAA
FMO11353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phae2-RC | 1147 | CG16997-RC | 38..514 | 8..469 | 1785 | 93.9 | Plus |
Phae2-RB | 886 | CG16997-RB | 38..514 | 8..469 | 1785 | 93.9 | Plus |
Phae1-RB | 1248 | CG16996-RB | 319..539 | 89..310 | 395 | 78.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12111147..12111503 | 8..362 | 1560 | 98.3 | Plus |
2L | 23513712 | 2L | 12109735..12109935 | 89..289 | 375 | 79.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:38:38 has no hits.
FMO11353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:49 Download gff for
FMO11353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16997-RB | 10..391 | 1..380 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:59 Download gff for
FMO11353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phae2-RB | 33..414 | 1..380 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:07 Download gff for
FMO11353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phae2-RB | 33..414 | 1..380 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:07 Download gff for
FMO11353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12111142..12111523 | 1..380 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:59 Download gff for
FMO11353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12111142..12111523 | 1..380 | 96 | == | Plus |