FMO11355.5prime Sequence
605 bp (605 high quality bases) assembled on 2011-12-09
> FMO11355.5prime
CAGTCGACATGTTTCGTAGCTTGGTGAATATTACAAGCAAATACAAAGTC
CTACGCGGCATGATATCGTATGGCACCCTCTGGCCCTGCGGCTCCCTCAT
CGAGCAGACCATGATCGAGAAGAAGACATTCCGGACGTACGACTGGATGA
AGTGCCTTAGGTTCAGCTTATTCGGCTTCTTCTTTATGGGGCCCACCATA
TATGTGTGGATCAGATTGGCCAGCGTTATGTGGCCGCGCACCGACATTAA
GTCATCGCTCTGCAAGGCGATCACCGAGCAGACCGCTTATGATCCGATGG
CCATCAGCTCGTTCCTCTTCTTCATGACCTTGATGGAGGGCAACTCGTAC
GCGGAGGCCAAGCGGGAGGTCAGCGATAAATTCCTGGACGCCTACAAGGT
GGGCGTTATTTATTGGCCCTGCGTGCAGACGGTGAACTTCGCCTTTGTTC
CGGCGCGAAACCAGGTCGTGTTTACCTCCTTCTTCAGCATGTGCTGGACC
ACCTTCCTGGCCTACGTCAAGTTCCTGCAGCTGCACCCTCCCGTCGATGT
GGACCACCACGCCCTGGACATCCACTTCCTGGAGATGGCAAGCTTTCTAG
ACCAT
FMO11355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2022-RB | 902 | CG2022-RB | 156..734 | 9..587 | 2895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4986668..4986888 | 587..367 | 1105 | 100 | Minus |
3R | 32079331 | 3R | 4988249..4988460 | 370..159 | 1060 | 100 | Minus |
3R | 32079331 | 3R | 4988536..4988689 | 162..9 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:38:57 has no hits.
FMO11355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:51 Download gff for
FMO11355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2022-RB | 147..741 | 1..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:07 Download gff for
FMO11355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2022-RB | 147..741 | 1..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:12 Download gff for
FMO11355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2022-RB | 147..741 | 1..594 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:12 Download gff for
FMO11355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4988251..4988458 | 161..368 | 100 | <- | Minus |
3R | 4988538..4988697 | 1..160 | 97 | | Minus |
3R | 4986661..4986886 | 369..594 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:07 Download gff for
FMO11355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 812383..812608 | 369..594 | 98 | <- | Minus |
arm_3R | 813973..814180 | 161..368 | 100 | <- | Minus |
arm_3R | 814260..814419 | 1..160 | 97 | | Minus |