FMO11359.5prime Sequence
635 bp (635 high quality bases) assembled on 2011-12-09
> FMO11359.5prime
CAGTCGACATGGAGCGAATAACATCGCCGGTGCTCGCGTATCCACGTGGA
TATACCGAATTTTCGGATCACAAAATGTCGAATATACCGCCGTATTTGGT
GTTCTTCTTCCTGGCCTTCATTTCCTGTGCGGTCACCTTCTGCTGCCTGA
GATTCTGCATTTGGGTGTGCTTCGAGGCCAGGGATTCCAGGAGTCGCAGA
CGCCGACATGATCGTAATGTATTCAACGCACAGGAGGATCCTTCATCGAA
CCGCTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGAGGCCAACC
GCATTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCAGCTACGAC
GAGGTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCAGCGGCTGG
AATGCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCATTGGAATCG
CTTCACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATTCCTCGTCC
GCCGCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCATCCACCTC
CCGCGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCCTGCTCCAT
TGCCAACGACAGCGGTGGCAAGCTTTCTAGACCAT
FMO11359.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12963-RE | 1108 | CG12963-RE | 284..893 | 8..617 | 3020 | 99.7 | Plus |
| CG12963-RD | 814 | CG12963-RD | 186..599 | 204..617 | 2025 | 99.3 | Plus |
| CG12963-RJ | 782 | CG12963-RJ | 159..567 | 209..617 | 2015 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15561814..15562221 | 210..617 | 2010 | 99.5 | Plus |
| 2R | 25286936 | 2R | 15559520..15559722 | 8..210 | 1015 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 324..283 | 111 | 73.8 | Minus |
FMO11359.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:54 Download gff for
FMO11359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 8..617 | 8..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:28 Download gff for
FMO11359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 284..893 | 8..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:28 Download gff for
FMO11359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 284..893 | 8..617 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:28 Download gff for
FMO11359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15559520..15559722 | 8..210 | 100 | -> | Plus |
| 2R | 15561815..15562221 | 211..617 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:28 Download gff for
FMO11359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11447025..11447227 | 8..210 | 100 | -> | Plus |
| arm_2R | 11449320..11449726 | 211..617 | 99 | | Plus |
