FMO11360.5prime Sequence
488 bp (488 high quality bases) assembled on 2011-12-09
> FMO11360.5prime
CAGTCGCCATGCATTTAAGAAAATTTTTGTATTGTTGGCCATTGAAATAT
GGCGTTATTACTGTGGGCATTGCTTTTGGACTCACGGACTTCATCGTGGG
CAGCATTGCATGGGACATGGTTATCAGAAACAAATATCCAGACTATGTGG
TCGAGTTCTTCAGAACCATGGACACCCGAATCTGTGTGTCCGGATTTGCC
ACCGTTTTCTGGTTGATGATGACCAACCACTTTCTTTTGATCTATGCCGT
CTTTTACCACAAACTTTTGATAATCGGAACTTGGCTGTTGATAAACTACA
TGGTATTTTTGTTCACCCTTGTCACCGTGTTGTTGGATAGCTTGCTAATC
CTTAGAATAATTGCCCTCGGATACTGTTTGATCGTGGTGAAGTCCTATTA
TAGTGAGTTGGCTGAGTCTCAGGAGGAATCATCCGATTCCAGTGAGGAAT
CTTCTAGTAGTGATAGCGATGCAAGCTTTCTAGACCAT
FMO11360.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42493-RA | 590 | CG42493-RA | 67..528 | 9..470 | 2280 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11778592..11778840 | 9..257 | 1245 | 100 | Plus |
2R | 25286936 | 2R | 11779064..11779173 | 361..470 | 520 | 98.2 | Plus |
2R | 25286936 | 2R | 11778905..11779007 | 258..360 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:38 has no hits.
FMO11360.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:54 Download gff for
FMO11360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 15..479 | 9..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:32 Download gff for
FMO11360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 67..531 | 9..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:31 Download gff for
FMO11360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42493-RA | 67..531 | 9..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:31 Download gff for
FMO11360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11778592..11778840 | 9..257 | 100 | -> | Plus |
2R | 11778905..11779007 | 258..360 | 100 | -> | Plus |
2R | 11779064..11779176 | 361..474 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:32 Download gff for
FMO11360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7666097..7666345 | 9..257 | 100 | -> | Plus |
arm_2R | 7666410..7666512 | 258..360 | 100 | -> | Plus |
arm_2R | 7666569..7666681 | 361..474 | 96 | | Plus |