FMO11361.5prime Sequence
386 bp (386 high quality bases) assembled on 2011-12-09
> FMO11361.5prime
CAGTCGACATGAGCAGTCAAATTAAAAAGTCCAAAACGACCACCAAGAAA
TTGGTGAAATCATCTCCGAAAGCTCAACTTCCAAAAGCTGCGGCACAGAA
TCAAATTTTTAGTTGCCAATTCGAGGTGTTTGGTCATGTGCAAGGTGTCT
TCTTTCGCAAGGCCATTGAGCTGGGCATAACTGGCTGGTGCATGAACACA
ACTCAAGGAACGGTTCAGGGAATGCTCGAAGGATCCTTGGACCAAATGAC
TGATATGAAATACTGGCTGCAGCACAAGGGAAGTCCTCGTTCGGTGATCG
AAAAGGCTGTATTCTCCGAGAATGAACCACTGCCCATCAACAACTTTAAG
ATGTTCTCGATTCGTCGCGCAAGCTTTCTAGACCAT
FMO11361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34161-RB | 553 | CG34161-RB | 66..425 | 9..368 | 1800 | 100 | Plus |
CG34161-RC | 563 | CG34161-RC | 66..440 | 9..368 | 1640 | 96 | Plus |
CG34161-RA | 577 | CG34161-RA | 66..440 | 9..368 | 1640 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10581500..10581637 | 146..9 | 690 | 100 | Minus |
2L | 23513712 | 2L | 10581094..10581205 | 368..257 | 560 | 100 | Minus |
2L | 23513712 | 2L | 10581260..10581358 | 257..159 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:39:45 has no hits.
FMO11361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:55 Download gff for
FMO11361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RB | 26..385 | 9..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:36 Download gff for
FMO11361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RB | 66..425 | 9..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:34 Download gff for
FMO11361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RB | 66..425 | 9..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:34 Download gff for
FMO11361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10581261..10581355 | 162..256 | 100 | <- | Minus |
2L | 10581424..10581440 | 145..161 | 100 | <- | Minus |
2L | 10581502..10581637 | 9..144 | 100 | | Minus |
2L | 10581094..10581205 | 257..368 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:36 Download gff for
FMO11361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10581094..10581205 | 257..368 | 100 | <- | Minus |
arm_2L | 10581261..10581355 | 162..256 | 100 | <- | Minus |
arm_2L | 10581424..10581440 | 145..161 | 100 | <- | Minus |
arm_2L | 10581502..10581637 | 9..144 | 100 | | Minus |