FMO11362.5prime Sequence
341 bp (341 high quality bases) assembled on 2011-12-09
> FMO11362.5prime
CAGTCGACATGAATGCTTTGAATGCTTTTGGAAAGGCCATCGGCTGGATG
GACATTGCGGGAGTTTTGTTCTTCGAAATGATAATGTTCTATATGATGCG
ACGTCGTCGATTGGCACAAAAATCAGAAGTTGCATCGATTGAAGCACAAG
AGAAGTGCCATAGAGATTCATTGCCCAATCTCTTGACAAGGAAAAAGCTG
AGTGAAAGCGAAAACATTTGGATATTCTGGGGCTACCTGTTGATGCTGAA
TATTTGGATTGGGGTCACTCTGCTCATGATAGCTGGCATCTCATTTGTGG
GTGAAAACAAAAACCGAAGCTTAGCAAGCTTTCTAGACCAT
FMO11362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43127-RC | 698 | CG43127-RC | 37..351 | 9..323 | 1545 | 99.4 | Plus |
| CG43127-RD | 687 | CG43127-RD | 37..324 | 9..296 | 1425 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10625395..10625563 | 177..9 | 830 | 99.4 | Minus |
| 3L | 28110227 | 3L | 10625206..10625335 | 307..178 | 650 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5241..5272 | 95..64 | 106 | 81.2 | Minus |
FMO11362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:56 Download gff for
FMO11362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 34..351 | 3..323 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:38 Download gff for
FMO11362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 34..351 | 3..323 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:36 Download gff for
FMO11362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 34..351 | 3..323 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:36 Download gff for
FMO11362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10625206..10625335 | 178..307 | 100 | <- | Minus |
| 3L | 10625395..10625566 | 3..177 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:38 Download gff for
FMO11362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10618306..10618435 | 178..307 | 100 | <- | Minus |
| arm_3L | 10618495..10618666 | 3..177 | 97 | | Minus |
