Clone FMO11364 Report

Search the DGRC for FMO11364

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:113
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42810-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11364.5prime Sequence

354 bp (354 high quality bases) assembled on 2011-12-09

> FMO11364.5prime
CAGTCGACATGTTTCCCACCTATTCGATCAATGATGTCGCCGCCAATGAG
GAAGTAGATCATACCCAGCAAGACTTATCTTCAAAAGTCGAAGCCGATAT
GCAGTCGATCATTCGTTTGGCCTACCAGGAGAACGAGGCTCTGATCCACC
AAAAAGTTATGAGCGCGATGAAGCAACGCGAAGAGGAGTTGGCCAAGCTG
TGGGATATTCGATCATCATTATCAAGCTTAGCGCAGATCAGGGCTGCTCG
TGATGAGGAACTAAGAGCTCTATTGGACCAAATCGTTTCGAATGCGGACA
GTAGCGATGAAGATGAAGAAAAGGAAGATCCCTTTTGCAAGCTTTCTAGA
CCAT

FMO11364.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG42810-RA 503 CG16849-RA 136..463 9..336 1640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13459816..13460143 9..336 1640 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:39:55 has no hits.

FMO11364.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:56 Download gff for FMO11364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 44..373 9..340 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:42 Download gff for FMO11364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 44..373 9..340 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:40 Download gff for FMO11364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 136..465 9..340 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:40 Download gff for FMO11364.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13459816..13460146 9..340 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:42 Download gff for FMO11364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13459816..13460146 9..340 99 -> Plus