Clone FMO11365 Report

Search the DGRC for FMO11365

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:113
Well:65
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42758-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11365.5prime Sequence

398 bp (398 high quality bases) assembled on 2011-12-09

> FMO11365.5prime
CAGTCGACATGTGCATGCAAGTTCCACGGTTTGGATGTCGAGTTCCAGTT
TCCAGTTCCCGTTGTAAGACCGGTGCAACCAGATCTTGTCGAAAGCCCGG
ATCTCGCTACAGAACCTTCTGCACTCCACCACCTCGCTGTAGTCCCAGAT
CCTGCTGCACATCCGAATCCTGCTGCAAATCCGGGTCCTGCTGCGGACCA
TGTGGGTCATGCTCGAATGGCTGTGCCGCCTGCTTATCCTCCTGCTGTGG
GATATTCCCCGAAACCTGCTGTGGTCCGTGGTGTGAGTCCTGTCTGGATC
CTTCCTGGTTCTCATGGCTGGCTCCCGATCTCGGGCGATCCTGCTGTTGT
GCTTGCATGACCTGTTGTCGATCCAAGTGCGCAAGCTTTCTAGACCAT

FMO11365.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG42758-RA 631 CG42758-RA 180..552 8..380 1865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14567682..14568054 8..380 1865 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:40:02 has no hits.

FMO11365.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:57 Download gff for FMO11365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42758-RA 172..552 1..380 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:46 Download gff for FMO11365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42758-RA 172..552 1..380 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:43 Download gff for FMO11365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42758-RA 172..552 1..380 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:43 Download gff for FMO11365.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14567674..14568054 1..380 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:46 Download gff for FMO11365.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14560774..14561154 1..380 99   Plus