FMO11366.5prime Sequence
1105 bp (1017 high quality bases) assembled on 2011-12-09
> FMO11366.5prime
CAGTCGACATGGCCCGCATCACCAGTATTCTGGACTTGGACCCCAGTTCT
CTGTTGTTCATCTTCAAGCTTCTAAGCTTGGAGGACCAGTTGCACTTGGC
GCGATGCTGTCGCATTTTTAGGGATGCCTTTCTTCGCCTGCATCGCCATG
ATTTCCAGGATGTTGTTGACAAGGATATGAGTATAAGGACTCTGGAGGAT
TGGCGCACCTTTCTGTGGCTCTGTGGCAGTCGCATCGGTACACTGGAATC
CCACTTTGACGATGATCACCCGCTGCAGCTGCTCCCGATGATCAGCAGAC
ACTGCTACCGACTGAAGTCCATCTCTATATACAATGCAACAGTGGCACGG
GCGCAACCGTATTTATTGAGGATGAGCTCCCTGGAAAAGGTGCACGTGCG
TAACTACAAGAGCACCAGCAAGGATCTAATAAAAGCCATTGGGATACACC
TTCCGCGGGTCAACAGTCTGAGCCTGGAGAGCTTTGAACGCAAGGAGTTA
CAAGAAGTACGTCAGTTTAGCGAGATGCTGGAACTTGGCTTGTACGACGA
CGTGACCGCCTCGGAATTCGCAACAATTGTGAAACCCATGAGGAAGCTGC
GATGCCTTCAGCTGCGCAACGCCAAACGCTTTCTGACTACCAGCAATCTC
AGGATGCTGGCCACCAACTGCCGCCACCTGGAGAAGCTGACGTTCAATGA
CTGCGACGCCGATCTGTTGGTCCTGCCGCAGTTTGTAAACCTCAAGTACC
TGCAATTATACTGCTCGGAGGATATGAAAACGCGCCTGTTCAAGCACTGG
CCAAAAGCCAGTGCTCCATTCAGTTGGAATACCTCATCCTGCACCGCAAA
CGCTGGATTGACGAGGAGCAGGCGCAGTACATCAGTGCTTTGAAGTGTCT
CCGGTGGCTGGTCTGCAAGCCTCGTGACGATCTGTGTGTTCACCACCTTG
CGAAGTGAGTCGATTAAAGTGCCTTTCCATACAGTCCGCCTCGTGAGATG
AGAACGCAGCTCTCCTTTTGTGCCACAATGACGCCTTCGTATTGAACATT
GCTATTGCTGGGCATCACGAACGCCTTCGTTGAAACGCTGACCAGCTACG
AAGGC
FMO11366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32221-RB | 1606 | CG32221-RB | 132..1236 | 9..1097 | 4995 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19834801..19835290 | 9..498 | 2450 | 100 | Plus |
| 3L | 28110227 | 3L | 19835354..19835846 | 499..989 | 2320 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:40:09 has no hits.
FMO11366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:58 Download gff for
FMO11366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32221-RB | 112..1151 | 9..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:52 Download gff for
FMO11366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32221-RB | 132..1171 | 9..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:47 Download gff for
FMO11366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32221-RB | 132..1171 | 9..1039 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:47 Download gff for
FMO11366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19834801..19835290 | 9..498 | 100 | -> | Plus |
| 3L | 19835354..19835903 | 499..1039 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:52 Download gff for
FMO11366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19827901..19828390 | 9..498 | 100 | -> | Plus |
| arm_3L | 19828454..19829003 | 499..1039 | 97 | | Plus |
