FMO11369.5prime Sequence
386 bp (386 high quality bases) assembled on 2011-12-09
> FMO11369.5prime
CAGTCGACATGGGCATCGAGATGAGGTGTCAGGACAGGAGGATCCTGCTA
CCTAGCCTACTCCTACTAATCCTTATGATCGGCGGTGTCCAGGCCACCAT
GAAGTTGTGCGGCCGCAAACTGCCCGAAACTCTCTCCAAGCTCTGTGTGT
ATGGCTTCAACGCAATGACCAAGAGAACTTTGGACCCCGTGAACTTCAAT
CAGATCGATGGCTTCGAAGACCGTTCCCTGCTGGAAAGACTGTTGAGTGA
TAGTTCGGTTCAGATGCTCAAGACTCGACGTCTTCGGGATGGAGTCTTCG
ACGAGTGTTGCCTGAAGTCGTGCACCATGGATGAGGTGCTGAGATATTGT
GCTGCCAAGCCGAGAACGGCAAGCTTTCTAGACCAT
FMO11369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp3-RA | 751 | CG14167-RA | 71..431 | 8..368 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9801618..9801803 | 368..183 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 9801875..9802050 | 183..8 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:40:29 has no hits.
FMO11369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:00 Download gff for
FMO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:05 Download gff for
FMO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:58 Download gff for
FMO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:58 Download gff for
FMO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9801611..9801802 | 184..375 | 98 | <- | Minus |
| 3L | 9801875..9802054 | 1..183 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:05 Download gff for
FMO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9794711..9794902 | 184..375 | 98 | <- | Minus |
| arm_3L | 9794975..9795154 | 1..183 | 97 | | Minus |
