FMO11373.5prime Sequence
848 bp (848 high quality bases) assembled on 2011-12-09
> FMO11373.5prime
CAGTCGACATGAATCTTTTGTGGGCTATAGTGATTGTGGCCGAACTGAAA
TGTCATACGGGCCATACTGTATTCCGAACTCGATGGCCCACATATGTACA
GAAAAAACACTATAATATTCCAGTAAAGCCACCCGATTACTGCAATGCAG
ACATTTGTCCGGCCAACAAGAAGCACATCACCTGCGGCTTCAAATTTTGG
TCTACGAAATGCGGTAGAAATCACGAGGGCGTCAGGATGAGCGATTATCG
CTATGATATCGTGAGGAATGTGAACAACTTTCGACGGAAGTTGGAATGGG
GCCTGGGGAATCTGCCCAGAGCGGTCAAATTTAAGAACATCAAGTGGGAC
GATGAGCTGTCGGTGATGGCGATGCGGGTCTCTAATCAATGCTTGCAGCA
CACTTTCTCACCCTGCGTGAATACGTTCCTCTACAAGGATGTGGGCGAGT
CCTCAGATTTCGTCAAGGTGCAGAACACTTCCAAGGGCTTCAACGTGATC
AGCTTCCTGAATATGTGGTTCGAATACCACAAGATGATGAAGCCCAGCTA
TGTGAACAACTTTCCCAATATAGCCCCTCAGGATCGGCTCATTATCTTCG
CCAATCTGATCTACGAGAAGAACAAGAAAATGGGCTGCGGAATGGTGAAG
TCGGGGCAGGGGCGCTTCCTGACCTGCCTCTTCGATAAGAAAATCAAGCC
AAACCAGAAGCTTTACACCACTCGGTTGAATGATCCATTTCGCACAAATC
GGAAAACAAACGAAACAGAATCGATCCAATCGAATAGTAGTAGCACAGAA
GCAATTGTAAATTTGAACACAGCGTATAAAGCAAGCTTTCTAGACCAT
FMO11373.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11977-RB | 857 | CG11977-RB | 5..826 | 9..830 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8998015..8998647 | 198..830 | 3165 | 100 | Plus |
| 3R | 32079331 | 3R | 8997701..8997820 | 9..128 | 600 | 100 | Plus |
| 3R | 32079331 | 3R | 8997878..8997951 | 124..197 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:45:30 has no hits.
FMO11373.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:31 Download gff for
FMO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:46 Download gff for
FMO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:46 Download gff for
FMO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:46 Download gff for
FMO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8997701..8997820 | 9..128 | 100 | -> | Plus |
| 3R | 8997883..8997951 | 129..197 | 100 | -> | Plus |
| 3R | 8998015..8998647 | 198..830 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:46 Download gff for
FMO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4823423..4823542 | 9..128 | 100 | -> | Plus |
| arm_3R | 4823605..4823673 | 129..197 | 100 | -> | Plus |
| arm_3R | 4823737..4824369 | 198..830 | 100 | | Plus |
