FMO11382.5prime Sequence
1079 bp (1001 high quality bases) assembled on 2011-12-09
> FMO11382.5prime
CAGTCGACATGTCCGACGCCTTCGACGAGTCCTCGGAACTGGAACAGGAT
CCGCCGCCCTTCGGATCCGAGGCTAGCACTTCGAAGGCCAAGGCCGAACT
GGTGGCCATTGCGACTGCCTCTGCGGATCAGCAGGATATCGTCGAGGGCG
AGAAGGAGGGCGAGGAGCGAGAGAGTTGGGACAGCAAGATTATGTTCTTG
CTGGCCACCATCGGCTATGCCGTTGGCCTGGGAAATGTGTGGCGTTTTCC
CTATTTGGCGCAGAAGAATGGCGGCGGTGCCTTCCTGGTGCCCTACTTCA
TAATGCTGTGCATCCAGGGCATACCGATCTTCTATCTGGAACTGGCAATT
GGCCAGCGACTGCGAAAAGGAGCCATCGGCGTTTGGAGCCAAGTATCGCC
GTATCTAGGCGGCATTGGTATCTCATCGGCGGTGGTCAGCTATATAGTGG
CGTTGTACTATAACACTATCATTGCCTGGTGCCTGATCTATCTGCTACAC
AGTTTCGAATCGCCATTACCCTGGGCGGACTGTCCGACGAGGTTGTATAA
GAATTTTACCTACGACCACGAACCGGAGTGTGTGGCCTCATCTCCGACGC
AGTTCTATTGGTATCGCACCACATTGCAGTGCTCGGAGAGTGTGGATATG
CCGGAGAACTTCAATTACCACATGGCCATTGCGCTAATTGTCTCCTGGTT
TTTGGTCTACATCTGCATGGTCCAGGGCATCACGTCATCCGGCAAGATCG
TCTATATGACGGCCATATTCCCCTATGTGGTGCTTATAATATTTTTTTTT
TCGGGGCATCACCTTGAAGGGTGCTGCAGATGGGGTGGCACACTTGTTTA
CCCCACGATGGGAAACTCTATTGGATCCAGTCGTTTGGCTGGAGGCCGGC
ACACAGATCTTCTCTCGCTGAGATGGCTTTGGCCAGTCTGATAGCCTTCA
GTTCGTACATCCGGCGAATAATAATTGCTACAGGGCACGCCATAACTCGT
ATCGCTCACAACTGTGCACATCATCTTTTGCGGATGGTGTATTCTCTTCA
TTGTGTAAGGCCACGGCAACCTTTGATAG
FMO11382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10804-RD | 4353 | CG10804-RD | 476..1553 | 8..1077 | 4900 | 97.8 | Plus |
CG10804-RC | 4536 | CG10804-RC | 885..1962 | 8..1077 | 4900 | 97.8 | Plus |
CG10804-RB | 4127 | CG10804-RB | 476..1553 | 8..1077 | 4900 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3479555..3480350 | 1009..214 | 3620 | 98.6 | Minus |
X | 23542271 | X | 3480417..3480628 | 219..8 | 1045 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:40:54 has no hits.
FMO11382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:03 Download gff for
FMO11382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10804-RC | 184..1271 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:24 Download gff for
FMO11382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10804-RA | 468..1555 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:12 Download gff for
FMO11382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10804-RB | 468..1555 | 1..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:12 Download gff for
FMO11382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3479477..3480349 | 215..1079 | 97 | <- | Minus |
X | 3480422..3480636 | 1..214 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:24 Download gff for
FMO11382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3373510..3374382 | 215..1079 | 97 | <- | Minus |
arm_X | 3374455..3374669 | 1..214 | 98 | | Minus |