FMO11386.5prime Sequence
788 bp (788 high quality bases) assembled on 2011-12-09
> FMO11386.5prime
CAGTCGACATGAATAATGGGAATATAAAACGCCTTCAAAAGAAACTCAGC
GTTTCGAAAAAGCCAGCAGTCACTGTGGATTCACCATTGGCAAAGTATGA
CTCCTCGGGCATCTTGACCTGCATTATTTGCAGGATTCCTATCAAACCCA
ACGTCTGGAAGGTGCATATAAATTCCAAGCAGCACAAACTGAACGTCGAT
CAGGCTAAGCAGAATAAGGTGGAGAAACCCGTCACCACTACTGCACCCAA
GGATCCTACGGGTCCGTCCACCAAGACTTCAGCTCCTGCCAAAAACTCCA
GCACACTGCCAGATAAAACTCCACAGAGCAGCCAGGAAAAGCATCCTCCC
CTCATTCAAGAGAAAACTGCCCAGGGAAATGCGAGCAGCAAGCCTGAGAA
TGAAACTACTGTCGAGAAACTGCCAGAAAAGTTCTTCGACGAGGATAAGA
CCAATAAATCGGAGGCCGCTCGCCTTCAGGACGAGGAATGGCAGCGATTC
CAGCAGGAGATCAAGCGGGCGGACACGGAATCCAGTGAAATTGTGGCCGA
CGAGCAGGAGGACATCAATCTCAAGCGACACATCAAGGAGATCGACGAGC
AGATCGACAACTGGAAGAGATTTATTAAAATTAACGATCAGAAAAAAGTA
CTCCTTAGTAAAAAGCGAAGAGTAGACCCCAAGATGGAGGTCGATCCGGA
ATTGAGTTCAAGCGAAGAAGATTGCAGTGTGGATGATTTGTTCGACTGGA
GAACGAAAAATCTGCATAGCGCAAGCTTTCTAGACCAT
FMO11386.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11839-RB | 836 | CG11839-RB | 37..800 | 7..770 | 3820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25070203..25070878 | 95..770 | 3380 | 100 | Plus |
| 3R | 32079331 | 3R | 25069963..25070054 | 7..98 | 445 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:12:14 has no hits.
FMO11386.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:38 Download gff for
FMO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 31..800 | 1..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:17 Download gff for
FMO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 31..800 | 1..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:16 Download gff for
FMO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 31..800 | 1..770 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:16 Download gff for
FMO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25069957..25070050 | 1..94 | 96 | -> | Plus |
| 3R | 25070203..25070876 | 95..768 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:17 Download gff for
FMO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20895679..20895772 | 1..94 | 96 | -> | Plus |
| arm_3R | 20895925..20896598 | 95..768 | 100 | -> | Plus |
