FMO11388.5prime Sequence
791 bp (791 high quality bases) assembled on 2011-12-09
> FMO11388.5prime
CAGTCGACATGAAGGCAGTTACTTCAAGAGTGTTGGGTTCGATCCTAGTG
TTATTATTGATACATTTAACATCAGCAAAAGAAGCGGAGGTTCACTTAAC
AAATCCTCCAACAGAATGCAGACTGGTGTGTAATCCAGGGTATCATATCG
TGGTTAAAAAGGGTACCTTGTATCATAATGGTAGGAAGCTTGACGATAAT
GCACGGTATGCGCCGAAGATGGCGTGTGATTTGGAGAACAGTTGCAACTT
TAAATTTACGCCACAAACATTAAGTTACATGAATACAGCAATTAATGTAG
GCACACAACTAACTATTAATTACGACTGCAAGCGGGATAACTTCCAAGGA
GATCCGAGAAGGATAACAGATTATACGAAAACGCAAGGATGTCCGCAAGA
CTCTTTTGTTCAGAAACACGTCGCATATTTTAACGATGAAAATATTGCTC
CCTAGAGGGATACACCTGTCGCGCAAAGGGAAAGGGAAATGATTGCCATG
GGCGTATGTGCTCAGGTCAAACGTTTTAGGCAAAACAACCCAAGAACGCC
CATCGATCCACATCTTGGCACAGTGTACTTGATATTTGACAATAGAACAA
GTAAAAATGATTTCATGCCGAGTCCTGATGTTAGAAAGTGCCAACTTAAG
CCCAATTCTCTGACCAAGACATACAAGTATGATTGCGAGAGGAAAGCGGA
TAAATGGACATGTACTTTTGCCAGCAAGGGAAGGGACTTGGCCATAAATG
ACAAGATTACAAGTCACTTAGGAGCAAGCTTTCTAGACCAT
FMO11388.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43085-RB | 1193 | CG43085-RB | 298..1062 | 9..773 | 3810 | 99.9 | Plus |
CG43085-RA | 925 | CG43085-RA | 30..794 | 9..773 | 3810 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17645617..17646321 | 773..69 | 3510 | 99.9 | Minus |
3L | 28110227 | 3L | 17646381..17646440 | 68..9 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:12:29 has no hits.
FMO11388.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:39 Download gff for
FMO11388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43085-RA | 23..797 | 1..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:26 Download gff for
FMO11388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43085-RA | 23..794 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:24 Download gff for
FMO11388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43085-RA | 23..794 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:24 Download gff for
FMO11388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17645617..17646321 | 69..773 | 99 | <- | Minus |
3L | 17646381..17646447 | 1..68 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:26 Download gff for
FMO11388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17638717..17639421 | 69..773 | 99 | <- | Minus |
arm_3L | 17639481..17639547 | 1..68 | 94 | | Minus |