FMO11390.5prime Sequence
314 bp (-89 high quality bases) assembled on 2011-12-09
> FMO11390.5prime
CAATCGACATGCGGAATAGCACTCTGATTCTCATCGCCGTCGTTATGACT
GTTTGCATTTTTGCGAATGTAACTGGAGTAACTCGATGCAAGGGAAAGCC
CAAGGATTCAAAGTGTGCCGGGAATCTCGATGGCGGTAACAATCGCAAAA
GCAAATGCAAGAAATCGGCCAACAAAAATATGTGGCACTACAATACACGG
ACAAAAAACTGCACACAATTCAACTACCTAGGATGTGGTGGCAATAATAA
TCGCTGGTGCACAAAAGCATTATGTGAAGCCTGTCGACGACCAAAAGCAA
GCTTTCTAGACCAT
FMO11390.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-RA | 373 | CG42717-RA | 34..319 | 9..294 | 1415 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16032816..16033007 | 294..103 | 960 | 100 | Minus |
3L | 28110227 | 3L | 16033064..16033157 | 102..9 | 455 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:12:47 has no hits.
FMO11390.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:41 Download gff for
FMO11390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 21..315 | 1..300 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:34 Download gff for
FMO11390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 30..324 | 1..300 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:31 Download gff for
FMO11390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 30..324 | 1..300 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:31 Download gff for
FMO11390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16032810..16033007 | 103..300 | 98 | <- | Minus |
3L | 16033064..16033161 | 1..102 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:34 Download gff for
FMO11390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16025910..16026107 | 103..300 | 98 | <- | Minus |
arm_3L | 16026164..16026261 | 1..102 | 95 | | Minus |