FMO11394.5prime Sequence
671 bp (671 high quality bases) assembled on 2011-12-09
> FMO11394.5prime
CAGTCGACATGTGTGCGGCCCTCTTACGAAGTGTTAAATTGGTTTATTTA
CGGCCAATACTAGCTAAACCGAATTTCCAGCTCTTACACACCAGCAGCGT
GCTCCGCAAATGGCGGAATGCATCCTCCGGCGAAGTGGAACGGAAGCTCC
TCTTTGGCGACAGGCTACCAGATAACTATAAACTGATTTACCGGGCCCCT
ATCGAGAGCTACGTGACCTGGACGAAGAATATATCCACTGCCACGACCAC
TGTACTTGCTGCGGTGGCCGCCTATCACTATGCCACAACCATAAACTACC
TGGATATGGTCCAGAAAATGGACATAGCCATTCTGGTGTCCCAGGAATCA
GATCTGTACTACTTTGTGGGTGGATTTCTGCTTATAAACCTGGCGATTCG
AGCTTTTGTCGCCAAATATCCACTGAGAATATACAAGAGCTCGGAAAAAT
ACGTGTCTGTCTATGGGTCCCAACTACCCATTGGAACTGTAAAACACTAT
TTTGAACGCGGTCAAATAGCTGAATACAAGAATTTTTTAAATCCCTGGAG
CCACATTATGTACAAACTGGGCAACCGCTCCTCAATGCTTCTGGTTGATT
ACTTCAAGACCCCCTCGGAGTTCCACCAACTGTTCGCGACCAAACAAGAA
ACGGCAAGCTTTCTAGACCAT
FMO11394.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33228-RC | 737 | CG33228-RC | 46..690 | 9..653 | 3210 | 99.8 | Plus |
CG33228-RB | 809 | CG33228-RB | 100..744 | 9..653 | 3210 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:11:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24668737..24669096 | 448..89 | 1800 | 100 | Minus |
2R | 25286936 | 2R | 24668476..24668680 | 653..449 | 1010 | 99.5 | Minus |
2R | 25286936 | 2R | 24669152..24669231 | 88..9 | 400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:11:55 has no hits.
FMO11394.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:36 Download gff for
FMO11394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33228-RB | 94..752 | 1..662 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:08 Download gff for
FMO11394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33228-RB | 94..752 | 1..662 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:08 Download gff for
FMO11394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33228-RB | 94..752 | 1..662 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:08 Download gff for
FMO11394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24668468..24668680 | 449..662 | 97 | <- | Minus |
2R | 24668737..24669096 | 89..448 | 100 | <- | Minus |
2R | 24669152..24669237 | 1..88 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:08 Download gff for
FMO11394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20556675..20556760 | 1..88 | 95 | | Minus |
arm_2R | 20555991..20556203 | 449..662 | 97 | <- | Minus |
arm_2R | 20556260..20556619 | 89..448 | 100 | <- | Minus |