FMO11396.5prime Sequence
515 bp (-87 high quality bases) assembled on 2011-12-09
> FMO11396.5prime
CAGTCGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCCTAATTGGG
TTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAATCGATTTT
TGAAGATGACGTCGCTCTAAGGTCCAAGTCAAGTAAAGCTGATGCTCTGC
TTACAAAAACTACAGCAAAAGCGTCAGCATCAAATTTATTCTTTAAAGTC
ATTACAACAACCCGACCACCTGTGACAATCAGGCGCGTTGTAGCCAAGTC
AAAGGGTAAGGATCCTGAAAGAACTGACCTCCACCGCAAGCACCTCACAC
ATCACAAACATCACTCAAAAAACAAAAAAAAGAATCCACATAATCGTGCC
GAAGCGAATCGAAACAAGGATCATAGTCCCCATGATCCCCACAAAAACCT
GAAAAGAAAGGCAGAGGCACTCCCTAAGTCAAATCAGAATATAAATGGCA
CTACTTCTCTGGAAGCCAAGAGTACGTCTTTAAAAGATGTACATAAGGCA
AGCTTTCTAGACCAT
FMO11396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:11:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-RB | 621 | CG32457-RB | 28..516 | 9..497 | 2415 | 99.6 | Plus |
CG32457-RC | 555 | CG32457-RC | 152..450 | 199..497 | 1480 | 99.7 | Plus |
CG32457-RC | 555 | CG32457-RC | 28..151 | 9..132 | 620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:11:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22987669..22988157 | 9..497 | 2415 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:11:58 has no hits.
FMO11396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:37 Download gff for
FMO11396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 25..520 | 3..501 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:11 Download gff for
FMO11396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 25..520 | 3..501 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:10 Download gff for
FMO11396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 25..520 | 3..501 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:10 Download gff for
FMO11396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22987666..22988161 | 3..501 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:11 Download gff for
FMO11396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22980766..22981261 | 3..501 | 98 | | Plus |