Clone FMO11401 Report

Search the DGRC for FMO11401

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:114
Well:1
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32457-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11401.5prime Sequence

449 bp (449 high quality bases) assembled on 2011-12-09

> FMO11401.5prime
CAGTCGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCCTAATTGGG
TTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAATCGATTTT
TGAAGATGACGTCGCTCTAAGGTCCAAGTCAATCATTACAACAACCCGAC
CACCTGTGACAATCAGGCGCGTTGTAGCCAAGTCAAAGGGTAAGGATCCA
GAAAGAACTGACCTCCACCGCAAGCACCTCACACATCACAAACATCACTC
AAAAAACAAAAAAAAGAATCCACATAATCGTGCCGAAGCGAATCGAAACA
AGGATCATAGTCCCCATGATCCCCACAAAAACCTGAAAAGAAAGGCAGAG
GCACTCCCTAAGTCAAATCAGAATATAAATGGCACTACTTCTCTGGAAGC
CAAGAGTACGTCTTTAAAAGATGTACATAAGGCAAGCTTTCTAGACCAT

FMO11401.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32457-RC 555 CG32457-RC 28..450 9..431 2115 100 Plus
CG32457-RB 621 CG32457-RB 218..516 133..431 1495 100 Plus
CG32457-RB 621 CG32457-RB 28..151 9..132 620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22987859..22988157 133..431 1495 100 Plus
3L 28110227 3L 22987669..22987792 9..132 620 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:15:57 has no hits.

FMO11401.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:56 Download gff for FMO11401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 25..454 3..435 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:10 Download gff for FMO11401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 25..454 3..435 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:48 Download gff for FMO11401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32457-RC 25..454 3..435 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:48 Download gff for FMO11401.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22987666..22987792 3..132 97 -> Plus
3L 22987859..22988161 133..435 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:10 Download gff for FMO11401.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22980766..22980892 3..132 97 -> Plus
arm_3L 22980959..22981261 133..435 99   Plus