FMO11404.5prime Sequence
476 bp (476 high quality bases) assembled on 2011-12-09
> FMO11404.5prime
CAGTCGACATGCGTCTAGGCCAGCACTTCGATGACCAGTTAAAGCTGGCT
AGCGTCGAGTTGGGCGATTTCTCGGACGATGACCTGGCGCTCCTTGACAA
ATGCGCCCAATATTATTCACTTTTGCACATTCACGACATCAATCTGAACT
ACTTGCGCGACTTCTATTGTGCCAAGAAGAGGGAATGCATAGAAAACCGG
CAGACCACAGTGCAGCAACGCGTAGAGCTGCAGCGCATCCTCTCGTCCAT
CGAGGAGGCTACTAGGGACGTAGTTATGTTGGAGAGATTTAATGCTGCTG
CGGAAGAGCGGCTCATCCCGGATATCGTCGTAATGCAGCGAAACGCCCAA
CAGCTTGCAACAAAACAGGCCTTACTGGACCGGCAAAAAACCCTTAAGAT
CCCAAAGGATTTTAGCATTGAAAGTGTCATCGAGAAGGTAGATTCGCTGG
AGCAGCGCGCAAGCTTTCTAGACCAT
FMO11404.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wac-RD | 808 | CG13879-RD | 256..705 | 9..458 | 2235 | 99.8 | Plus |
| wac-RC | 633 | CG13879-RC | 81..530 | 9..458 | 2235 | 99.8 | Plus |
| wac-RB | 634 | CG13879-RB | 82..531 | 9..458 | 2235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 258486..258763 | 9..286 | 1375 | 99.6 | Plus |
| 3L | 28110227 | 3L | 258821..258994 | 285..458 | 870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:16:23 has no hits.
FMO11404.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:58 Download gff for
FMO11404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wac-RC | 76..535 | 1..463 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:22 Download gff for
FMO11404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wac-RB | 77..536 | 1..463 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:59 Download gff for
FMO11404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wac-RB | 77..536 | 1..463 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:59 Download gff for
FMO11404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 258481..258763 | 1..286 | 98 | -> | Plus |
| 3L | 258823..258999 | 287..463 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:22 Download gff for
FMO11404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 258481..258763 | 1..286 | 98 | -> | Plus |
| arm_3L | 258823..258999 | 287..463 | 98 | | Plus |
