FMO11418.5prime Sequence
470 bp (470 high quality bases) assembled on 2011-12-09
> FMO11418.5prime
CAGTCGACATGAATAAAGAAGCAACGAAAAGGCGGCGCCAGAGGTGCACC
GAATCACTCAAGGATATATTGTCAAATCTGCGCATTCGTAACAAAAAGGC
CTGGTTCAATTATGTAGACAAGACTAAATCGCCACATATAAGAAATTTGT
TGGCCAAAGAATCGTATAAAAAATTAAAAAATGCTTCCAAAACTTCAGGT
AAGGAAAAAAGAAAGATTGAAAAATTGCAACGTTCTTTAAAAAAAATGAT
GAAGCAAGAGTTACAAAAACAGGTGATTTACCTAAAGAATATTTGGGTGT
CCTTAGCACATGTCCTTGCACTACTTTTCGATCAAGGACCTATTGAGCAA
ATCAGCAGCCTGGTATTCACTATATTCACTATAACTAAATCTTTGGTAGT
TGGCATTAAGTATAAAACCAAAATGGAAGATTTCGCCGAGCATCACAGCG
AAGCAAGCTTTCTAGACCAT
FMO11418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42692-RB | 642 | CG42692-RB | 89..532 | 9..452 | 2205 | 99.8 | Plus |
CG42692-RA | 603 | CG42692-RA | 277..472 | 257..452 | 980 | 100 | Plus |
CG42692-RA | 603 | CG42692-RA | 89..278 | 9..198 | 935 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14008364..14008689 | 127..452 | 1630 | 100 | Plus |
2L | 23513712 | 2L | 14008189..14008306 | 9..126 | 575 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-27 20:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 493..557 | 200..135 | 111 | 65.2 | Minus |
FMO11418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:05 Download gff for
FMO11418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 58..519 | 1..463 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:02 Download gff for
FMO11418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 84..545 | 1..463 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:33 Download gff for
FMO11418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42692-RB | 84..545 | 1..463 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:33 Download gff for
FMO11418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14008184..14008306 | 1..126 | 96 | -> | Plus |
2L | 14008364..14008702 | 127..463 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:02 Download gff for
FMO11418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14008364..14008702 | 127..463 | 98 | | Plus |
arm_2L | 14008184..14008306 | 1..126 | 96 | -> | Plus |