FMO11420.5prime Sequence
1122 bp (1024 high quality bases) assembled on 2011-12-09
> FMO11420.5prime
CAGTCGACATGGCGATGCAGAAGTTCTTCAGCGTGCTGCTGCCGGATGTG
AAGCGGGAGCTGCGCCGCGGGATCATCGAGTGCTCCAAGCGGGGCCTCCT
GCACAGCACCAAGTGGCTGGCGGAAATGCATCACGGACTGGCCGATGTGC
ACATAGACAATGAGGCGCCTGATGAGGATCGCACATTCAGCGAGTGTCAG
CTGGAGGGGATTGCGCCGGAGGAGTACAGCGACTACTTCCTGGCCAAGAG
CTACTACGACGTGAGGGAGTACGACAGGGCGGCGCATGCGGTCAGGAACT
GCGAGTCCAGTGTTCCGCGCTTCCTGCACTTCTATTCCAGCTACATGGCC
AGGGAAAAGCGGCGACTGGACTCGACCACGGACCAGGCGAATCTGCACGA
ACCGAATCAGATGCGCGATCTCGCCGACCTGCTGGCTACGTTGCGCATGG
AATACGGCAAAAGTCGGCTCGATGGCTACGGAATATACTTATACGGAGTA
GTCCTGAAAGCACTGAATCTCAACCAGGCCGCCGAGCAAATGCTGGTCCA
GGCCATCAGACTGGTACCCATGCTGTGGAGCGCCTATCTGGAGCTCTCGC
CCCTCATCATGGAGAAGAAGAAACTGCTGAGCCTGCAGCTGGGTGGTCAC
TGGATGCGGCACTTCTTCATGGCGCACACTTACCTGGAGCTGTACCTCAA
CGACGACGGCCTGAAGATCTACGAGGACCTGCAGGCATCGGGTTTCAGCA
AGAGCATCTACTTGATTGCCCAGATGGCTCTGGTCTATCACAATAAGCGG
GATGTGGACAAAGGCGATTGAGCTGTACCAGGCGCTTCTCGAGAGCGCTT
TCTCCCTACCGCCTGGACAATGTGGACACCTATTCCCAATCTGCTGTTCG
TCAAGGAGATGAAAACCGAATTGGCCACAGTTGGCCCAAAAGGCTGTCAG
CATCCAACAAGTACCGCCCGGAGACGTGTTGTGGTAATAGGCACTACTAC
AGTATCCGCTGTTGATCACCAGTGGCCATTTCTACTTTCAACGCCGCCTG
AACTGGAATTCCAAGGCAGCCTTTCTAGAACAATCGTTGGCCGCGCGTCC
CAGTTACTGATCATAAATCCAT
FMO11420.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:18:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31687-RB | 3653 | CG31687-RB | 77..1129 | 9..1065 | 4930 | 98.4 | Plus |
| CG31687-RC | 6696 | CG31687-RC | 77..1129 | 9..1065 | 4930 | 98.4 | Plus |
| Cdc23-RB | 2184 | CG2508-RB | 77..1126 | 9..1065 | 4870 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20450301..20451270 | 9..983 | 4595 | 99.3 | Plus |
| 2L | 23513712 | 2L | 20459418..20460384 | 9..983 | 4535 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:18:11 has no hits.
FMO11420.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:06 Download gff for
FMO11420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31687-RB | 95..1147 | 9..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:09 Download gff for
FMO11420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31687-RC | 77..1129 | 9..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:39 Download gff for
FMO11420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31687-RC | 77..1129 | 9..1065 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:39 Download gff for
FMO11420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20450301..20451276 | 9..990 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:09 Download gff for
FMO11420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20450301..20451276 | 9..990 | 99 | -> | Plus |
