FMO11426.5prime Sequence
338 bp (338 high quality bases) assembled on 2011-12-09
> FMO11426.5prime
CAGTCGACATGACGACGCCGGCGACAACAGACAAGAACAACGACAACAAC
ACCAGTAGCAACACCAACAACAACAGCAGCAACAAGAAGTCCAACGAAAG
CCGGCAACAACAACGTGACATGGCCAGGACAACAACAATGGCAGCCGGAA
AAGCGTCGGGAAAAATGAGGGAGGAAAATATATGGCATACACTTAGGCGC
GCCAAGTCGCTTACTGACTTTTTGCCTATCTCGCCCGCCCGATTTCCCCC
ATTTTCCGCCTTTCCCCCCCATCCACCCCTCGGTGCACCACACTGGAGCG
ATACAGTGTGTGCATTGGCCGCAAGCTTTCTAGACCAT
FMO11426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 20:19:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20248223..20248423 | 9..209 | 1005 | 100 | Plus |
2L | 23513712 | 2L | 20248503..20248614 | 209..320 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:19:05 has no hits.
FMO11426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:10 Download gff for
FMO11426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG40341-RB | 1..315 | 9..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:32 Download gff for
FMO11426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG40341-RB | 177..496 | 1..320 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:56 Download gff for
FMO11426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20248215..20248423 | 1..209 | 98 | -> | Plus |
2L | 20248504..20248614 | 210..320 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:56 Download gff for
FMO11426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20248215..20248423 | 1..209 | 98 | -> | Plus |
2L | 20248504..20248614 | 210..320 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:32 Download gff for
FMO11426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20248215..20248423 | 1..209 | 98 | -> | Plus |
arm_2L | 20248504..20248614 | 210..320 | 100 | | Plus |