Clone FMO11426 Report

Search the DGRC for FMO11426

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:114
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG40341-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11426.5prime Sequence

338 bp (338 high quality bases) assembled on 2011-12-09

> FMO11426.5prime
CAGTCGACATGACGACGCCGGCGACAACAGACAAGAACAACGACAACAAC
ACCAGTAGCAACACCAACAACAACAGCAGCAACAAGAAGTCCAACGAAAG
CCGGCAACAACAACGTGACATGGCCAGGACAACAACAATGGCAGCCGGAA
AAGCGTCGGGAAAAATGAGGGAGGAAAATATATGGCATACACTTAGGCGC
GCCAAGTCGCTTACTGACTTTTTGCCTATCTCGCCCGCCCGATTTCCCCC
ATTTTCCGCCTTTCCCCCCCATCCACCCCTCGGTGCACCACACTGGAGCG
ATACAGTGTGTGCATTGGCCGCAAGCTTTCTAGACCAT

FMO11426.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 20:19:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20248223..20248423 9..209 1005 100 Plus
2L 23513712 2L 20248503..20248614 209..320 560 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:19:05 has no hits.

FMO11426.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:10 Download gff for FMO11426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG40341-RB 1..315 9..321 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:32 Download gff for FMO11426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG40341-RB 177..496 1..320 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:56 Download gff for FMO11426.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20248215..20248423 1..209 98 -> Plus
2L 20248504..20248614 210..320 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:56 Download gff for FMO11426.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20248215..20248423 1..209 98 -> Plus
2L 20248504..20248614 210..320 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:32 Download gff for FMO11426.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20248215..20248423 1..209 98 -> Plus
arm_2L 20248504..20248614 210..320 100   Plus