FMO11430.5prime Sequence
404 bp (404 high quality bases) assembled on 2011-12-09
> FMO11430.5prime
CAGTCGACATGGGAGACGACAACCAGCGATTCCAATTCCAACTGCAGGCA
GTGGCAACAGTTTTCTTGTTGGTTTCACAGCTTTGCTTTGCCCTGCCCTT
TGCATCTTCCACCGGAAACGATATAGAAAACGATGGGAACATTCAGAATT
CGGCCAGTGGACGACCTGTGGATTATCACACGGTGGTGGGCCACTTCAAG
GACTTCTTCATGTACCTGCCGGTGATGATGACCACGCTGAAGGAGACGAT
GTCAGGATTCCCCAAGTTCGCCGAGGGCATGCGCATCCTGACTTCTGGCA
AAGGACGAGTGGACGGCGAGGATTGCAAGTGCAGCCAAAATGCATTGGCC
AGCGGCGAACTCTTGGACACCAATTCTCGCTTCGGTGCAAGCTTTCTAGA
CCAT
FMO11430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14187-RA | 492 | CG14187-RA | 22..400 | 8..386 | 1895 | 100 | Plus |
| CG14187-RB | 438 | CG14187-RB | 86..346 | 126..386 | 1305 | 100 | Plus |
| CG14187-RB | 438 | CG14187-RB | 22..86 | 8..72 | 325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20112357..20112671 | 386..72 | 1575 | 100 | Minus |
| 3L | 28110227 | 3L | 20112762..20112826 | 72..8 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:19:38 has no hits.
FMO11430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:12 Download gff for
FMO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14187-RA | 17..400 | 1..386 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:46 Download gff for
FMO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14187-RA | 17..400 | 1..386 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:08 Download gff for
FMO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14187-RA | 17..400 | 1..386 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:08 Download gff for
FMO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20112357..20112670 | 73..386 | 100 | <- | Minus |
| 3L | 20112762..20112829 | 1..72 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:46 Download gff for
FMO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20105457..20105770 | 73..386 | 100 | <- | Minus |
| arm_3L | 20105862..20105929 | 1..72 | 94 | | Minus |
