FMO11432.5prime Sequence
452 bp (452 high quality bases) assembled on 2011-12-09
> FMO11432.5prime
CAGTCGACATGTGGAAACCGGACTCCAAGGCGGGCATTATTTGCTCCGGG
GCTGCATCGATCTGCCTTGCGATCGCCTACCTCATCATATTCGCCAACTT
GAGGGAATTATCCTACGCATTTGGAGTTCACATAGCGTCCATGCAGATTA
TCAGCAGCGCAGTACTCATCGGCGGAGCCATCAAGGAGAGGCACAAGCTC
TTCGTGCCCTGGATGATCACAACCGCCATGTTCCTCTACTTAATGGGTTA
CTCATCCATTGTGCTGCTGGCCATGGGCGATTGGTTAATCGTCATGTTTT
GCGCAGCGCCAATGATAGGCTGCCTCGGAATGGCATTCTATGCGGTGCAG
AAGGCCTTCCGCAGGATGCGCAAGGATGGGCTTCCACCGAAGTATGCCGA
CATGCAAGTCAAAAGTATTTTGGTGAATCCCATAGCAAGCTTTCTAGACC
AT
FMO11432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12824-RB | 575 | CG12824-RB | 35..460 | 9..434 | 2130 | 100 | Plus |
| CG12824-RA | 692 | CG12824-RA | 266..516 | 184..434 | 1255 | 100 | Plus |
| CG12824-RA | 692 | CG12824-RA | 35..212 | 9..186 | 890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7790691..7790826 | 184..319 | 680 | 100 | Plus |
| 2R | 25286936 | 2R | 7790877..7790994 | 317..434 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 7790402..7790498 | 9..105 | 485 | 100 | Plus |
| 2R | 25286936 | 2R | 7790556..7790637 | 105..186 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:19:53 has no hits.
FMO11432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:14 Download gff for
FMO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12824-RB | 3..446 | 1..443 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:55 Download gff for
FMO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12824-RB | 26..469 | 1..443 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:13 Download gff for
FMO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12824-RB | 26..469 | 1..443 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:13 Download gff for
FMO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7790393..7790498 | 1..105 | 96 | -> | Plus |
| 2R | 7790557..7790636 | 106..185 | 100 | -> | Plus |
| 2R | 7790693..7790825 | 186..318 | 100 | -> | Plus |
| 2R | 7790879..7791003 | 319..443 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:55 Download gff for
FMO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3677898..3678003 | 1..105 | 96 | -> | Plus |
| arm_2R | 3678062..3678141 | 106..185 | 100 | -> | Plus |
| arm_2R | 3678198..3678330 | 186..318 | 100 | -> | Plus |
| arm_2R | 3678384..3678508 | 319..443 | 96 | | Plus |
