FMO11442.5prime Sequence
1062 bp (971 high quality bases) assembled on 2011-12-09
> FMO11442.5prime
CAGTCGACATGTCATCGATCTCGGCGCAGGGCGTGGTCGAGCGAGCATCC
GCGGAGTTGTCGAAGCGGATCAATGGCCTGGGCCTGCGCTCGAAGCACCA
TCATAGCAGCACATCCAGTGGTGCTGGTGGCGCCGGCGATGCTGCATCCC
CGGCAGGAGCCACGCCCACTCCGGCAGCGCCCAGCGGCAAGACGTCGGTG
ATGGAGCGCGTAACGAACGCCCTGTGCGGCGGTGGCAACTCAAATTCTAA
CTCAGGATCGAATAGCTCCAATAGCAACACCTCTTCAGCGTCTGCCACCG
CTGCCACATCGCCCGCCAGCAACGCCAATCCTCCACAGACGCCGGACAAA
CCGTCGCGTGGCAGTAGCCCCAGTCCCGGCGGTATCACAATGCCAGGTGG
CCAGTCGCAGGTCCAGAACTCCACACACCACCTCCTGCAGCAGCAACAAC
AGCAACAGCAGCATATGCAGCTGCAACAATCGCAGCAGCAGCATCTCCAG
CTGCAAGCCTCCACGCTGATCAACTCCAACCACCATGTGATGGTGGGTCC
TGCTCCGCCCACTGGCATGCCTCTGGGTGCCCCGCCCACGCCGACAGTGA
AGTCCATTGCCAAGCAGATGAACATAACCATACCGGGTGGCGGAGTAAAT
CCCGGTTCGCCCACCTTCAGCACCATGGGCATGGTGGCCGCCCCAGAAGG
CGGCGGCCAGTGCTGGAGGTACACCGTTGCAGTTGCGGGAAACAACTGCC
CAATCCCTCACCTGCACCATCCGTATGGCAGTATGGGCATCAACGCAACA
TCGCCGCTGATCATGCAACACCAGCTCCACCCGCCGCCTATCCACAGCAT
CGAGCAGCTGATTGCTCGACGATCGCTTCCTGAGCCGCCTCTTCCAGTAC
TTCTCCCCCTACGAACGGCTCATCCCTGCCCAAGTTGTGCATCAAGTTGC
AGGACACACTGTACCGCAGTCCCCGTATACTGGAAGCGGCCTGTTGCCCC
AGCTGCATTGGCTGCGAAGCTGGCTCTCAAATTGACTATGTTGTCATCGC
TGCTAAACTCTA
FMO11442.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:21:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32085-RA | 3030 | CG32085-RA | 577..1568 | 9..1007 | 4640 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11674491..11675482 | 1007..9 | 4465 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:21:08 has no hits.
FMO11442.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:20 Download gff for
FMO11442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32085-RA | 564..1573 | 1..1017 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:31 Download gff for
FMO11442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32085-RA | 568..1577 | 1..1017 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:40 Download gff for
FMO11442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32085-RA | 568..1577 | 1..1017 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:40 Download gff for
FMO11442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11674481..11675486 | 1..1020 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:31 Download gff for
FMO11442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11667581..11668586 | 1..1020 | 97 | | Minus |
