FMO11457.5prime Sequence
1119 bp (995 high quality bases) assembled on 2011-12-09
> FMO11457.5prime
CAGTCGACATGTCGCAGCATAACTATACGAACCCGGCCTTCTGCCAGAAC
AGCGAGTATTACCCGGTGCCCAGCGGCAACTCGTCGCGAGTGGAGTCCAT
CTACAACAGAAGCCTCCAGATGAACTTTGGAGCGGCTCCTCCGCGCGCCA
CTCGAGATCCCCGCGAGGGTCCACTGCGAATGCAGCGTAGCATGTCCACG
CGATCGGTGACGCGGAAACAACACCAGCAGCAGCAGCAGCAGCAACACCA
ACAGCAGATACACCAGCAACACCTGGCTCAGCAGCAGCAACACCAGCCGC
AATCCTCTAGTGGTCGCTATGCCTTGGTTCCCCTAGAGGAGCTGAACAGC
AGTAGGGCCAGTAGATACGCCATAGTTCCAGGACAGGCGGCACAGAGACT
GGCCCGATCACAGGATAATCTGGATCGCTATGGCTCCAGACATGGATTGC
ACGAAGAGGAGGAGCCTCACTCCTTCCACGAGGAACCCCATCAGGAGACC
CAGTTTGCCAGCTTGCCACCGATACTTAATTTGCCGCCCAAGCCCAGGAA
TATTAACAACAATACCAATGCCAATCAAACCCAGATTAAGCATGCTTTTA
GTAGCGACTTCGGCAGCAAGACCTTCTTGATAGTGGATAAGAATAGCAAC
CAGAGGTACCAGATGGTGCCCACCGCCGAGGACGAGGAGCTGGTAGACGA
GAACCAGGAGATCATACAGATGCACAATGGCCGCGCCCATCGATATGCAG
TGGTGCCCACGGATGCGGACGACGATGATCTGGCGGAGGAGCAGAGCAGC
ACGAAACCTGCCTGAGCAACATGGAATTGAGCAGCAGTACGCAGCGAGGA
CCTCAACGCCGCAGCAAAAGAATGCGGCTGCCGCTACGAGGGCCCTGCAC
GAGCTCCTGACCACGCCAGGAAGATGCAGCCGCCCTCCGCGATTGGCGCA
CTCAACGCCCCCGGAACGCCGCCCACCACGAGCAGCTGCAGCTGGAAGCG
CTTGAAATCTACAAAGCACAGATCTACAAAGCACCAGTTGAACGTAGTAG
GAGTCCTTCACTTGCACTTCGCAGAATCGAACTCTCCCCAGAACTTCCAT
ACGAACGTAGCCGCTTTCC
FMO11457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spdo-RA | 2087 | CG31020-RA | 128..1226 | 7..1089 | 4910 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30476811..30477802 | 7..997 | 4690 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:23:08 has no hits.
FMO11457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:30 Download gff for
FMO11457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 115..1196 | 1..1065 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:28 Download gff for
FMO11457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 120..1201 | 1..1065 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:25 Download gff for
FMO11457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 120..1201 | 1..1065 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:25 Download gff for
FMO11457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30476803..30477850 | 1..1035 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:28 Download gff for
FMO11457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26302525..26303572 | 1..1035 | 97 | -> | Plus |
