FMO11459.5prime Sequence
1119 bp (1012 high quality bases) assembled on 2011-12-09
> FMO11459.5prime
CAGTCGACATGGAATCTGTGAATAAATGCGGTAAAAGCGCATCCACAAGA
AATTGTACGGTGAAAATGAGCCGGAAAATGTGGGTGCTTTCGCTGCTGGC
GCTGGCAGCGCTACAACTGCACTCGGGCAGCGAAGTGGCTGCACATTTGA
ATGTTTTCCTAAATCCCGTGGAAGTAATGCGTTTATTAGGCGTCTCTGCT
GAGGTTTACTACGTTCGCGAAGGTCATATAAATAACTACGCTTTGAACTT
CATTGTACCAGTTCCGGCGAATGTCAAGGACATTAGTTTCACCTGGCAGT
CGCTGGCGGGGCGTGGCCTTCCCTACAGCATCAATGTGGTCAGCTCCGAT
CAGGAAGTGCTTCCTCGACCGGCGATCAATGTGTCACACAGTGGGGAAAT
CCCCACGACCATACAAACCTGGTCCATTGCCCTCAAGTGCAGCGGATTGA
AAGCGGCGGAGGTGGATGTGACTGTCAGCCTGGAAGTGGTGCTCAACCGG
TCACTGAACAATGTAACTCATCTGGTGTTTCGGAGGAAGAAGATCTGTCT
TATGAATGACAGTGCCGAGGATTTGTCGGAGGATGTGGACGATCCCCAGT
TGCTGGAGACCGTAATGTTACCACCCACTGGATTGATCACCCTGGTCGTT
GGTGTTTCTGTGGCCATGGGATCTGTGTGCCTGCTCCTCATGATTGCCTA
TTGCGTCAAGGGAGCAGCCAACAAGAGGCAGCATCATCAACACGGAGGAC
AGCCCATGAGGACTTCGAGCTTTCAGAGACTAAATACCCATCCGCCCTGC
CAGTCTTCCATGGGATCGGCTGCTTATATGACGCCTTCGATTATAGCTCC
AATTCATGGCTCCTCCTTGCCACGGAAAGTTCCAGTTTCCGTAGAGCAGC
AACATCCGGAGGAGCTTCATCGCCGATTTCCGAGTTGACCGTGAGCGCTG
CAGGGTACGACTATCGAGTCTCCTGCAAGATGACGTTTGACGAGTTTATC
GTGGCACCTACACGACCCCTCAGGATGTTCTGGTCAACGGTGGCCAGCAA
GCTAGCCAATTGCAGGTGGCCTTCTCCCACTCAGAAGGAATGCTGCCTAT
GGCCCTTCATCCTGGAAAT
FMO11459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:21:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dnt-RB | 2639 | CG17559-RB | 389..1508 | 9..1117 | 5100 | 97.8 | Plus |
dnt-RA | 2630 | CG17559-RA | 389..1508 | 9..1117 | 5100 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19340048..19340936 | 1068..188 | 3980 | 98.1 | Minus |
2L | 23513712 | 2L | 19362658..19362839 | 190..9 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:21:48 has no hits.
FMO11459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:24 Download gff for
FMO11459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dnt-RA | 386..1506 | 9..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:52 Download gff for
FMO11459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dnt-RA | 389..1509 | 9..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:56 Download gff for
FMO11459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dnt-RA | 389..1509 | 9..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:56 Download gff for
FMO11459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19339994..19340934 | 190..1119 | 97 | <- | Minus |
2L | 19362659..19362839 | 9..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:52 Download gff for
FMO11459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19339994..19340934 | 190..1119 | 97 | <- | Minus |
arm_2L | 19362659..19362839 | 9..189 | 100 | | Minus |