FMO11462.5prime Sequence
1135 bp (1047 high quality bases) assembled on 2011-12-09
> FMO11462.5prime
CAGTCGACATGCCTTACCCTTTATATCCCGCCCATAGCCAAGTAATGTCG
GAAACGTCAAGCGTCAACGTGGATGCGGACCGAGATTGCAGAAGGATTGA
GGGCCTCCGACAGCGCTCACAACGCCTTGCTGCCCGCCTCCAGCAGATGC
AGAGGGAAATGGAGTCTAATGCATCCAGCAAAGACCTATCGGCCAACAAT
GCCGTTATTCCGCTGCAGCCACTAATGCGCTGGGCGGAACCACGGCCACA
TCCCAACCAATCCCAACCATCTGCTCGGAGCAACAGCAGGCAGGCCATTC
CTTACGGTGTGCCAGTATCCACGCCAGCGCCGGTAGCTATGCAATTGCCC
TACCACGTAGCATTCGCCTCCTACCAGGCGACCATGCAGATTCCCTGCCT
TCAGCCACTTTCGCATTTGCACGTCGTGTCTAGTCCCAGCCATCGGTTAA
TAGCGAAAAAGAAGTCGAAGCGGGCTCTTCGAAATGAGGTGGAAGCTCTT
CAGGATATGGTCAAACATCTTTCACACCTCTCCCCAGATGTTAACGCGTA
TGCCTGCCAGCTGATACGTAAAAACGAGATCCTTTCTCAGCTCGAGTGGA
GTCAGACCAGGTCAGAAGCACATCCGCAACAGGTTGGTTACCAGGGGCGG
CATCGCCACGATTCTGAGGTCTCTGCTACAAACAATGGAAGTCATGTACA
GCAGCAACCGAAACTAGGACGAAGGCAACGCAATAGCAAGAAAAACGATG
GATCCGGTAGCAATGGGACCCAATCGCAAAAAACCGAACTAGAGGCCATG
CGGTCGTACATAAACAAGATTGTCCAACGTCACGTGGGTATGGATCACCA
GTTGTCGGAAGACTTGATTTTCAAAGGTAAACTTCTCCGACCTGGAAGCG
CATGCGCAGAGAACTAGTTGCGGCGGGTTATGGGCGCATTGTAGAGAGGA
AATCCGGGTTAACCCGCAAGAACAACAGACAGGCCTTTATAATCATGTCC
ACTGATCGAGAAGCACTTCGAACGAGAATGGCATCGTGCTCTTGCCAGGT
GGCTTAGCGCCTTATGCTCGAATGGGTGACAAAGTACGTGCAATTCTTGC
TAACCTGATGCTCAGGTTAGTTTCAAAGACGCCTG
FMO11462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16940-RC | 3546 | CG16940-RC | 42..1156 | 9..1130 | 5165 | 98 | Plus |
CG16940-RA | 3605 | CG16940-RA | 136..1215 | 44..1130 | 4990 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 212844..213844 | 44..1048 | 4730 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:23:40 has no hits.
FMO11462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:33 Download gff for
FMO11462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16940-RC | 42..1143 | 9..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:45 Download gff for
FMO11462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16940-RC | 42..1143 | 9..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:40 Download gff for
FMO11462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16940-RC | 42..1143 | 9..1116 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:40 Download gff for
FMO11462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 212750..212784 | 9..43 | 100 | -> | Plus |
3L | 212844..213898 | 44..1104 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:45 Download gff for
FMO11462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 212750..212784 | 9..43 | 100 | -> | Plus |
arm_3L | 212844..213898 | 44..1104 | 98 | <- | Plus |