FMO11464.5prime Sequence
1106 bp (1033 high quality bases) assembled on 2011-12-09
> FMO11464.5prime
CAGTCGACATGTGGATCATTTTCCTCATCATCGGATTGCTGGTGCTCGGG
CTGCTGGTTCTGCTAATTATTGCGGCGCGGTATCAGCGAGATTATTGGCG
CTATCTGGACATTCCACACGAGAGACCCAAAAAGCTATGGCCTATCATTA
GGCAAATAATGACGCAGACATTGAGTACGGAGGCTATGAAGGCGGAGCAC
TACTCGGCCATATACAAGAAGTTCAAGGGAAGCGGTCCCTTCTGCGGATT
CTACGCCCTGTTGCAGCCACGCGCATTGATCCTCGATCGGGAGCTGATTA
GGCAAATAATGATCAAGGACTTTTGGAACTTTAATGATCGAGGATTGTAT
TGCAATCAAAAGTCGGATCCTTTGTCGGGTGATCTGTACGCTTTGCGGGG
AGAGAGCTGGAAGGAGATGCGTCAGAAATTGGATCCAAGTCTCGAAGGTG
ATCGCATGTCCTTGCTGTATGACTGCCTGTACGAGGAGGCGGAACAGCTT
CTCTTGACAGTCAATAGCACCCTAATGAGCCAGCCCCATTCCACCGTTCA
CATACAAAAGATTATGAGGCGTTATGTGCTGTCTTCGTTGGCCAAATGCG
TTTTTGGTTTGAATGCCGAACAGAGGAAAACGTATCCTCTGGAGGATTTT
GAGCAGATGACCGAGCTGGCCTTGAATAGCCACAAACATGGCTACCTAAT
GAACCTGATGATGATCCGGTTCCCCAACTTTTGTCGAATGTTGCGCATGC
GTCGCACGCCCAAACAGGCGGAGGAGTATTTTATTAAGCTCCTTACGAGT
ATTGTGGAACAACGAGAGACGTCCGGAAAGCCTCAGAAGGACTACTTACA
ACTTTTGATCGACGTCAAGGCACTGGAGTTTATTACCCACCAGTATGAAG
CGGATAAGGAACTAGTGCCCATCTGCAGAACGAGTTGGCCGCCCATGCAG
TTGTCTTCTGAAGCGGCTACGAGCAACGGCCAACACTCTATCATATGTAC
TCTATGAGCTAGCATGCATCCCAAATTGCAAGTACGTGTGCCGGGAGAGA
GTCAGACCATCGAGCACATGATGTCCCATAACAATGAGGCATAAGTTCCT
AGTTCT
FMO11464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp317a1-RC | 3904 | CG17453-RC | 302..1396 | 7..1089 | 5060 | 98.3 | Plus |
| Cyp317a1-RB | 2078 | CG17453-RB | 476..1570 | 7..1089 | 5060 | 98.3 | Plus |
| Cyp317a1-RA | 1904 | CG17453-RA | 302..1396 | 7..1089 | 5060 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14899493..14900533 | 7..1041 | 4895 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:23:55 has no hits.
FMO11464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:34 Download gff for
FMO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 1..1051 | 9..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:51 Download gff for
FMO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 298..1354 | 1..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:45 Download gff for
FMO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 298..1354 | 1..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:45 Download gff for
FMO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14899489..14900543 | 1..1052 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:51 Download gff for
FMO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10786994..10788048 | 1..1052 | 98 | <- | Plus |
