FMO11465.5prime Sequence
1152 bp (1031 high quality bases) assembled on 2011-12-09
> FMO11465.5prime
CAGTCGACATGGTAGCTAAATGGTTGAAACGGCTGGACGAGGTGAAAGGT
GAAGAGAAATCCCAGCAGGACAAAGAAATGGAATCCGAGTCACCAGCTCA
GAACCAAGAGAAACAGAAAGTACTAGCTAACCCATCAGTTGTGGACCTTT
GCAGCGATGAAGAAGTTGAGAAATCAGTTGTTCGTTTTCGTGATATGGAA
ACACTGGACGTGGAATCAGTTATCCCCAATTCCTCGCTTATGGTCCTTGA
CGATGAGCTGGGCGAGATCACCCTGCAGGACTATGCTGATCACATCAATG
GAAAATTGGATGAAGCGTCTTTGAGGAAGCGAAATCGCCGGGAGGAGGAT
AGCCCATCTCATAACGCCAAAAAACAGAGATCGATAAAAGAGTTTTTGAC
TCCCAAGAAATCAAAGCAAGGCCAAACATCATCTTTTGCCTTCCAGCGCT
GTTTGAAAACGTATAGCAGACGACCAAAGCTAGAAAATTATACAAGTGGC
GAAGCAGGCGGTATCACATCCAACATAGTTATGGTTGATGAAAGTCAAGA
AGAAGCCCGCGAATCTCTTATAATTGATAATCCAAAACCAAAAACCCCAA
CAGATTGGAGGGAGCCTAACCAAAGTGATATCATGAAAGAGGTATCAAAT
TCCGACGACTTGATCGAGAAAGAAACTTCACCCTGTGATCCCTTAGCAAG
CTTAGATATTAATGTTCCAAGTAAATCCGACCCAGAAGTGCCTTCTGAAA
TTTATGGAGAAGCGAACAAAAATATAAACATATTGAACGAATCACCAAAG
AACATGCCGCTCCTGAAGGACATACTTTCAACTGACCCAGAGGCTCATAA
AGAAAATAATCCTGATATGAGTATAACACCAGAAGTTCCCACCCAATCCC
CAATAAATGCGATACGAATTCGTAGTGACCTGTTCCCTACGCAAAGAATA
TGATTCGGGTTCGCACTGACCTGTTGCAAGGAGCAAGTTGACCCGTCTGA
ACTTCAAGCCACTGGGAACAGCTGAAAGCTAAGTTGTACCGCCAGAAAAC
AGGTGCCATAGCTTACAGCGGAAAACACCAGAACCTGATGAACTATAATC
CCACATCATGGACAAACATCTACAAATTCACGAATTCCGGAATGCGAATG
CA
FMO11465.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17129-RB | 2310 | CG17129-RB | 444..1575 | 9..1136 | 5195 | 97.9 | Plus |
| CG17129-RA | 2379 | CG17129-RA | 513..1644 | 9..1136 | 5195 | 97.9 | Plus |
| CG17129-RC | 2201 | CG17129-RC | 335..1466 | 9..1136 | 5195 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 678620..679745 | 1131..9 | 4980 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:24:03 has no hits.
FMO11465.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:06:34 Download gff for
FMO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RB | 440..1460 | 9..1027 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:54 Download gff for
FMO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RC | 335..1355 | 9..1027 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:48 Download gff for
FMO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RC | 335..1355 | 9..1027 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:48 Download gff for
FMO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 678725..679745 | 9..1027 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:54 Download gff for
FMO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 678725..679745 | 9..1027 | 99 | | Minus |
