Clone FMO11483 Report

Search the DGRC for FMO11483

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:114
Well:83
Vector:pMK33-CFH-BD
Associated Gene/TranscriptDap160-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11483.5prime Sequence

1102 bp (1009 high quality bases) assembled on 2011-12-09

> FMO11483.5prime
CAGTCGACATGAACTCGGCGGTGGATGCGTGGGCTGTGACCCCGAGGGAG
CGTTTGAAGTACCAGGAACAGTTTAGGGCACTCCAGCCGCAGGCAGGATT
CGTTACCGGCGCCCAGGCCAAAGGGTTCTTCCTGCAGTCCCAGCTGCCGC
CCCTGATCCTTGGCCAAATATGGGCTCTGGCGGACACTGATTCCGACGGC
AAGATGAACATCAATGAGTTCAGCATAGCCTGCAAGCTTATCAACCTCAA
GTTGCGCGGCATGGACGTTCCCAAGGTTCTTCCTCCCAGCCTGCTGTCGT
CTCTTACCGGCGATGTCCCCTCGATGACGCCACGTGGCTCCACAAGCTCC
TTGAGCCCTTTGGATCCACTCAAGGGAATAGTTCCGGCAGTAGCTCCAGT
TGTTCCCGTTGTGGCTCCACCGGTGGCTGTGGCTACTGTCATTTCACCGC
CTGGAGTCTCAGTGCCGTCTGGCCCCACACCCCCCACCAGCAATCCACCT
AGTCGCCACACGTCTATCTCAGAGCGAGCGCCATCGATCGAGTCTGTCAA
CCAAGGAGAATGGGCCGTTCAAGCTGCCCAAAAGCGTAAATACACGCAGG
TGTTCAATGCTAATGATCGCACCCGATCTGGTTACTTAACTGGATCCCAG
GCACGCGGCGTTCTCGTACAGAGCAAGTTACCCCAGGTCACGCTGGCCCA
AATCTGGACGCTGTCCGACATCGACGGCGATGGACGGCTGAACTGCGACG
AGTTTATTCTTGCCATGTTCCTATGCGAGAAGGCCATGGCTGGTGAGAAA
ATTCCGGTTACCTTGCCCCAGGAATGGGTACCGCCCAACTTGCGCAAATA
AAATCGCGACCGGGATCGGTCTCAGGGTGTATCCCGTCCTGCTCACAGCC
GGCCTCCCGACACGCATCTGTTTCATCCCAAGCGGAGTGGGAGTCGTGAT
GCTGACCAACAGCCGGACTACCTGGACAAACTTCCTCGAGACAGCGAAAG
AGAATTATGTAAGGGTCAAGCGAGCCTGATCGTAGGCCCAATATGAGACC
GCACGCAGGACGGAGAGGATAGAAGACAAGGACGTGAAAGGCTGATAGCG
TG

FMO11483.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dap160-RH 5171 CG1099-RH 334..1379 9..1041 4845 98.4 Plus
Dap160-RG 5420 CG1099-RG 334..1379 9..1041 4845 98.4 Plus
Dap160-RC 3970 CG1099-RC 334..1379 9..1041 4845 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21141178..21141553 547..172 1880 100 Minus
2L 23513712 2L 21140569..21141008 980..548 1870 98.2 Minus
2L 23513712 2L 21141624..21141788 173..9 810 99.4 Minus
Blast to na_te.dros performed on 2014-11-27 20:14:01 has no hits.

FMO11483.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:47 Download gff for FMO11483.5prime
Subject Subject Range Query Range Percent Splice Strand
Dap160-RC 340..1388 9..1044 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:15 Download gff for FMO11483.5prime
Subject Subject Range Query Range Percent Splice Strand
Dap160-RC 334..1382 9..1044 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:02 Download gff for FMO11483.5prime
Subject Subject Range Query Range Percent Splice Strand
Dap160-RC 334..1382 9..1044 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:02 Download gff for FMO11483.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21140569..21141008 548..980 98 <- Minus
2L 21141178..21141552 173..547 100 <- Minus
2L 21141625..21141788 9..172 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:15 Download gff for FMO11483.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21140569..21141008 548..980 98 <- Minus
arm_2L 21141178..21141552 173..547 100 <- Minus
arm_2L 21141625..21141788 9..172 99   Minus