FMO11485.5prime Sequence
353 bp (353 high quality bases) assembled on 2011-12-09
> FMO11485.5prime
CAGTCGACATGGCCACCTCAACGCTGCAATCTCCGTCGCCGTCGCCATCA
AACGCCTCCGTGTCATCCAAGAATCCGCAGCTGAAGCGCGTAGTGTACTC
CAAATATCGGGAACTACTTGGTTCTTATAATGATAAGGCCAATGCCATCA
TCGACACTCTGCCCGCATATATGGTTCGTCAGGATCGCGGATTTCAGTTG
TCGGAGCTGCCCGTGAACGGGGATGCCAATCGCAACGGCCTGGAATTGTC
GTATGGACAGCGCGGAGGAGGCGGATCCGGAAACGGTGGCTACGAGGCGC
CCGCGTGCGTGCAGAACGCGATGATGACAAAAGACAAGAAGCCCTTCACC
TAC
FMO11485.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44085-RO | 8804 | CG44085-RO | 257..601 | 9..353 | 1725 | 100 | Plus |
CG44085-RN | 3940 | CG44085-RN | 257..601 | 9..353 | 1725 | 100 | Plus |
CG44085-RL | 3418 | CG44085-RL | 257..601 | 9..353 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13267731..13267975 | 9..253 | 1225 | 100 | Plus |
2L | 23513712 | 2L | 13271296..13271398 | 251..353 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:14:21 has no hits.
FMO11485.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:48 Download gff for
FMO11485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6043-RI | 491..844 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:23 Download gff for
FMO11485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44085-RL | 248..601 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:08 Download gff for
FMO11485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44085-RL | 248..601 | 1..353 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:08 Download gff for
FMO11485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13267722..13267972 | 1..250 | 98 | -> | Plus |
2L | 13271296..13271398 | 251..353 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:23 Download gff for
FMO11485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13267722..13267972 | 1..250 | 98 | -> | Plus |
arm_2L | 13271296..13271398 | 251..353 | 100 | | Plus |