FMO11486.5prime Sequence
863 bp (644 high quality bases) assembled on 2011-12-09
> FMO11486.5prime
CAGTCGACATGGCCTCTAAGGCCATTTGGTTGACTATACTCCGCTTTATG
GGCGACTTGCCGGATGTTGTTTCCTCGCCTACTCTTCACGTATTCGATAA
TGAAAACTTGATGAGTGATTTGGCAAGCCTCTTGAACACTTCTGATTCCT
ATAAGCCTCGCTTATTTGTGCGCCAATCCCAAAGACGTATCCCAAAGCCT
TTGGCTAGTGGTGAGAAGGAAGCCCAGGAATTCTATCAACACTGGCTCAA
CGTTCCCACAAGTCACCTGGAGAAAATTCACTTCATCATAGGTCATGGTA
TAATAAAGAATAGCTTACGAGACGAAATCTTGGCCCAGATCTGCAAGCAG
CTATATCTTAACCCAAGTCGGAGCTCCTACTCCCGCGGATGGTTGCTCCT
TTCGCTATGCCTCAGCTGCTTTCCACCCAGCAAGGAGTTTGAGCCACACT
TGCGCAGTTTCATGAAGCAGGGAACTGCCCAACTGCAGGCCACTCCATCC
CTGCAGCGATTGGAGCGAACCCTGGTCAATGGACCACGCTGTCAGCCACC
TTCGTTATTTGAGCTCCACGCAATCCGCGGTCGCCACCCGCTTAGGTTGG
ACATTCACCTGATGGTGGAGAAGAGTTGAGGGTGGGCATAAGTCAAGATC
ATCACTTGCGGTAGGGTACGCCCTTGCTTGTGTAGCTGTGACATCGTGAA
GAGCTGCTGAGATCATGACAGATGTGCTGACACTCAGTGTGATGAACCAG
CAGACATAAACATCACGTATGATCTCTCAAGAAGGGTGTTGATGCGGTTC
TGCCACGTGCAGTACGAGCTGTGCATCTAACTGAAATCTGGAAAGTGTCC
GAGCAGATCAGAC
FMO11486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myo28B1-RA | 6588 | CG6976-RA | 3323..3929 | 9..615 | 3035 | 100 | Plus |
| Myo28B1-RB | 6443 | CG6976-RB | 3178..3784 | 9..615 | 3035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7686025..7686325 | 19..319 | 1505 | 100 | Plus |
| 2L | 23513712 | 2L | 7686387..7686683 | 319..615 | 1485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:14:28 has no hits.
FMO11486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:49 Download gff for
FMO11486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RE | 288..908 | 1..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:26 Download gff for
FMO11486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RB | 3172..3792 | 1..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:13 Download gff for
FMO11486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RB | 3172..3792 | 1..623 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:13 Download gff for
FMO11486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7686025..7686325 | 19..319 | 100 | -> | Plus |
| 2L | 7686388..7686691 | 320..623 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:26 Download gff for
FMO11486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7686025..7686325 | 19..319 | 100 | -> | Plus |
| arm_2L | 7686388..7686691 | 320..623 | 99 | == | Plus |
