FMO11488.5prime Sequence
1119 bp (981 high quality bases) assembled on 2011-12-09
> FMO11488.5prime
CAGTCGACATGTTGAGGAATTTGTTAAAGTCACGTTTCCCGGCACCGCGC
AGCATGTCCTGCTTCTCGCACGTGATGAACCCGATAACGGGGCAGAACTC
CTGGCAGGAGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACG
CCGGATTCGGCGACATGCTGCACGACTGGGAGCGCAACCAGAAGTACTTC
GCCGCTCTGAGAAAGACCATAGCCGGAATGCGTGAGGCGGGCAGGGAGGT
GCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGTCGATGATGGCCT
TGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAATG
GCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGT
GCGTCTCATCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGC
CGCGAAAGGCGAATCTGCTAGTGGCCGAGCTGCTGGATACAGAACTGATT
GGCGAGGGTGCCATCGGCATCTACAACCATGCCCACGCCGAACTGCTGAC
CGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCTATGCCCAGGTGG
CGCAATCTCCGCTAGCTGCGCAGTGGAACAGCCTGAAAACGATTGCCAAC
TTGGACGGCGAACCTTTGCTGCACCCACCGGAGCAGCTGAATAGCTGCCA
AGGAGAAGCTGCGCTGCACGACGTCCAGCTGTCGCAGCTGCCAAGCTCCG
CATTCCGCCCGCTCACCGATCCCGTCGAGATCTTCCAGTTCGATTTCCAG
CGCAAGCAGGGAGCGGGAGAACAGCGGTCGCAATTACTTAAGCTGCAGTC
CAAGCAACCGGGAGCCGCTGAGCTGGTCTTCTACTGGTGGGACATTCAGC
CTGGACGATGACGGGGAGATATTGCTCAGCTGTGCCTCCTTACTGGGGCG
CATCCACAGCTGAAGGAGCTGGCAGCTGAGAAGGCGAAGGATCATCCGCT
GCCCAATGGTGGTGCCCTGGGCGGGATCACTGGAATGCAGGCCATTCTTA
CCTACTTACCCAAGCCCCTTGCACCTGCTTCGGAGGCAAGGTTTATTCCT
TCCACCCTCAGCCTGCAAC
FMO11488.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art7-RB | 2230 | CG9882-RB | 21..1109 | 9..1112 | 5010 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23077988..23079018 | 1045..9 | 4760 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:14:39 has no hits.
FMO11488.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:50 Download gff for
FMO11488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 13..1089 | 3..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:31 Download gff for
FMO11488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 15..1091 | 3..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:18 Download gff for
FMO11488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 15..1091 | 3..1092 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:18 Download gff for
FMO11488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23077924..23079024 | 3..1119 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:31 Download gff for
FMO11488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18965447..18966547 | 3..1119 | 97 | | Minus |
