FMO11490.5prime Sequence
1112 bp (1009 high quality bases) assembled on 2011-12-09
> FMO11490.5prime
CAGTCGACATGCGGTGCAGGATCTTGGTGCTGTGTGCATTCATATGCCTC
CTTGTAATTTTGACCGAGGCCAGGCAGAGGAAAGTTAACCATTCCGCTGA
TAGAAGATCATTGGCAGTCAGAAGTGGACACAGGAATGAGCGGAGTAGTG
CTCTTCATGGAAGAGGATTGGCTGCACGATCAAGGAATCAAAGGAAACGC
AGATTAAATGCTGCCAAGAGAAGCAGGAGGAAGCGTAACTTGGCTAGAAA
GTCAAATCGGAAAATTAGGGCCAAGACCGAGTCAATCGTTAGAAGTGATT
CTAGTTACGCTACTTTACCATTGGACTTCCAACAGAACTTCGTGCGAACC
ACCGACAACCTGCGATCGGAGAAGGCCTTTTTGGCCAATCGATATGGCTT
TAGTTTTGCCAAAAGTTCTGGAACGGCTACTTTGAAAAACACGGCGAACA
TGGAGTATACCTGCAAAATGAACATTGGTACACCCAAGCAGAAGTTCACA
GTTCTTCCGGACACCGGAAGTTCGAATATTTGGGTGCCAGGACCGCATTG
CAAGAGTAAGGCCTGCAAGAAACACAAACAATATCATCCGGCCAAGTCAA
GTACCTATGTTAAGAATGGGAAATCCTTTGCCATCACCTACGGTTCGGGT
AGTGTGGCAGGAGTTCTGGCCAAGGATACGGTGAGAATAGCTGGGCTGGT
TGTGACCAATCAAACTTTCGCCATGACCACCAAGGAACCGGGAACCACTT
TCGTGACCTCAAATTTCGATGGTATACTAGGGCTGGGATATCGATCCATA
GCGGTGGACAATGTGAAGACCCTGGTGCAGAATATGTGCTCGGAGGATGT
GATCACCAGTTGCAAGTTTGCCATTTGCATGAAGGGCGGCGGCAGTTCCT
CTTGAGGTGGTGCAATAATCTTCGGCAGCTCCATACAGTGCTAATAGCGG
AATCCAATAGCTACCACATACACTCCGGTGACCAAAAAGGGTACTGGCAG
TTCACTCTGCAGGACATTTACGGTGGGGCGGCAACAATGACGCTCGTCTG
CCAGCCCATTTGGGGATCTCGGACCTTCTATTGATAGACTCCGCAGGCCA
TCTACACAGATC
FMO11490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17283-RA | 1585 | CG17283-RA | 6..1034 | 8..1037 | 4945 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17407881..17408896 | 8..1022 | 4810 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:14:46 has no hits.
FMO11490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:51 Download gff for
FMO11490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..1028 | 9..1037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:36 Download gff for
FMO11490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..1034 | 5..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:20 Download gff for
FMO11490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..1034 | 5..1037 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:20 Download gff for
FMO11490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17407874..17408909 | 1..1037 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:36 Download gff for
FMO11490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13233596..13234631 | 1..1037 | 98 | | Plus |
