FMO11502.5prime Sequence
810 bp (-25 high quality bases) assembled on 2012-05-14
> FMO11502.5prime
ACATAGTATCATCACTGTGCGAAGTCACCCTCCTGCTCTTGGCCCCAGCT
GTCGGGCAACGGGCTGGACCAACTGGTGGCCACCCGCTTGCCTCCCAAGA
CGTCTTTGTGAAGCCCGACTTGGACGACGTGATCGACGAGAATCGCGCCG
TGCTGTTTTCCATGCAGTCGGCGGATCCGCCGCCGCCTTGTGAGCTGCGC
TTCCAGATCCCGAACCGCTTCAAAATCGCCGCGCTCAACCTGATTTGCAG
CGCTCCCAAGGTGGAGCTGTTCATTGGACCCTTGCAGGAGTACTGCGAGA
CCATCTACGGCACTTGCGTCGACGATGAGGACCCAGAGGTTGCGGTGCTA
CCCTATCGCTATGACATGGACTGCTTTCGATCCGGGATAAATGACATATA
CCTGAAGATGCTCACCTCGGCCAGCGAGATCTGCGTTTACTTAGCCCTGC
TCCAGGTGGCGCCGAATCCCAACGGCATAACCACCCAGTTGCCCATCCAA
TGGATGCTCAGCGAATCCAAGAACTGCTGCAAAAGGGTGGCACGAGTCCC
TTGAAGAAGGAGGAGCAAGCCGAGAAGTTCGAGCATGTCATGAGCCTGAT
GAAGGGCTATTCCCCGCAGGCGAACGACCATACCCAAGAGACTGCACCGC
CTTCCACCGATGTTGCAATCCTCTAGGAGCACATCGACATGAGATTTGAG
AAGCTGACGCTGTTAGTGTCTAAGAGACTGGACACTGCGAGGCCCAGCAG
ACGGAAAATTAAACAAATTATTGCCTTGCTGGAAAAGGAAAAGCAAGCTT
TCTAGACCAT
FMO11502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11882-RB | 1018 | CG11882-RB | 73..837 | 33..792 | 3295 | 95.8 | Plus |
| CG11882-RA | 1087 | CG11882-RA | 142..906 | 33..792 | 3295 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29147197..29147880 | 792..113 | 2875 | 96.1 | Minus |
| 3R | 32079331 | 3R | 29147950..29148031 | 113..33 | 300 | 93.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:40:26 has no hits.
FMO11502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:58:53 Download gff for
FMO11502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 131..911 | 24..797 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:55 Download gff for
FMO11502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 131..911 | 24..797 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:53 Download gff for
FMO11502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 131..911 | 24..797 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:53 Download gff for
FMO11502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29147192..29147880 | 113..797 | 95 | <- | Minus |
| 3R | 29147951..29148042 | 24..112 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:55 Download gff for
FMO11502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24972914..24973602 | 113..797 | 95 | <- | Minus |
| arm_3R | 24973673..24973764 | 24..112 | 91 | | Minus |
