FMO11504.5prime Sequence
512 bp (512 high quality bases) assembled on 2012-05-14
> FMO11504.5prime
CAGTCGACATGCCATTTTTAAGAAAGCTGGTCAGACAAGAATTTTGCTTT
TGCATCTCGCTGACTTCTGGATGCATCATAGTTTCATTCTACACACTGTT
TTTCGGATTCCTTAACGCAGGCACTACTGTGGATGAGGTTATATACAAGA
ACACACTCAAGACTGATGTTTATGCGAAATGGTTCAATGTATTTCATATA
GCTCTGATGATCGCAGCTGCAGTTATCCTGCTGATATCTGTTATGACGAA
GTACTTAAGGATCGTTTTCGTGTGGATGGCCATGTTCATCATTCATATGA
TATCGTACTACATCATCTTCAATGCTTTGATAAATGTTCGCAATCCGTTC
TTTAAAAGTGCTGTCTCTGCGATTATTTATGTTTTCGTGAATTTAGTGAC
GTTGGGAATCGATTTATTTTGTTTGCTCAAAGTCTACACGTATTATTATG
TAAAAGCGCATCCAGATGAATTCAGACCAGTTTGTGTGGATAAAGCAAGC
TTTCTAGACCAT
FMO11504.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-RB | 1089 | CG42263-RB | 48..533 | 9..494 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19955246..19955404 | 406..248 | 795 | 100 | Minus |
| 3L | 28110227 | 3L | 19955608..19955752 | 153..9 | 725 | 100 | Minus |
| 3L | 28110227 | 3L | 19955453..19955547 | 248..154 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 19955103..19955192 | 494..405 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:40:35 has no hits.
FMO11504.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:58:55 Download gff for
FMO11504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 9..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:01 Download gff for
FMO11504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 9..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:57 Download gff for
FMO11504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 9..494 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:57 Download gff for
FMO11504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19955103..19955191 | 406..494 | 100 | <- | Minus |
| 3L | 19955247..19955403 | 249..405 | 100 | <- | Minus |
| 3L | 19955453..19955547 | 154..248 | 100 | <- | Minus |
| 3L | 19955608..19955752 | 9..153 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:01 Download gff for
FMO11504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19948203..19948291 | 406..494 | 100 | <- | Minus |
| arm_3L | 19948347..19948503 | 249..405 | 100 | <- | Minus |
| arm_3L | 19948553..19948647 | 154..248 | 100 | <- | Minus |
| arm_3L | 19948708..19948852 | 9..153 | 100 | | Minus |
