Clone FMO11506 Report

Search the DGRC for FMO11506

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8157-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11506.5prime Sequence

365 bp (365 high quality bases) assembled on 2012-05-14

> FMO11506.5prime
CAGTCGACATGAAACTACTGATTGTTGTTCTTGCCCTGGTGGCCGCAGTT
TTGGCCAGACCTCAATTTGGACCTGGTGGTCAAGGAGGATTTGGTGGTCA
ACAAGGCGGCTTTGGTGGACAGGGAGGATTCGGTGGAGGTCCTGGATTTG
GTGGACAAGGTGGTTTCGGTGGCGGACCCGGAGAATATGGCGGTCAAGGT
GGTTTCGGTGGCGGACCGGGAGGATATGGCGGTCAAGGTGGTTTCGGTGG
CGGACCGGGAGGATTTGGCGGTCAAGGTGGTTTCGGTGGCGGACAAGGCG
GCTTTGGCGAACACCACAGACACCATGGAGGACATCATGGGCGCTTCGCA
AGCTTTCTAGACCAT

FMO11506.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8157-RB 824 CG8157-RB 25..363 9..347 1695 100 Plus
CG8157-RA 427 CG8157-RA 25..363 9..347 1695 100 Plus
CG8157-RB 824 CG8157-RB 127..286 147..309 520 88.3 Plus
CG8157-RB 824 CG8157-RB 163..325 111..270 520 88.3 Plus
CG8157-RA 427 CG8157-RA 127..286 147..309 520 88.3 Plus
CG8157-RA 427 CG8157-RA 163..325 111..270 520 88.3 Plus
CG8157-RB 824 CG8157-RB 160..232 222..294 275 91.8 Plus
CG8157-RB 824 CG8157-RB 238..310 144..216 275 91.8 Plus
CG8157-RA 427 CG8157-RA 160..232 222..294 275 91.8 Plus
CG8157-RA 427 CG8157-RA 238..310 144..216 275 91.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15325964..15326291 347..20 1640 100 Minus
2R 25286936 2R 15326041..15326200 309..147 495 88.3 Minus
2R 25286936 2R 15326002..15326164 270..111 495 88.3 Minus
2R 25286936 2R 15326017..15326089 216..144 275 91.8 Minus
2R 25286936 2R 15326095..15326167 294..222 275 91.8 Minus
Blast to na_te.dros performed 2014-11-28 02:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
springer 7546 springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. 2429..2451 4..26 106 95.7 Plus

FMO11506.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:58:56 Download gff for FMO11506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8157-RA 15..363 1..351 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:05 Download gff for FMO11506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8157-RA 18..366 1..351 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:00 Download gff for FMO11506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8157-RA 18..366 1..351 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:00 Download gff for FMO11506.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15325961..15326293 16..351 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:05 Download gff for FMO11506.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11213466..11213798 16..351 98   Minus