FMO11509.5prime Sequence
549 bp (549 high quality bases) assembled on 2012-05-14
> FMO11509.5prime
ATAGCCCTTGGGGCATGTGCTGCTGAGCCTTCTCCCCGAACTCTAAACTC
ATTTTGCTCTTACTTAACGATGGAAAGGAAACTGTTTCGAGTCTGGGCAA
CACCAAGAAGTGTTTTGCTCGTTACCTACCGGAACTGGAAAGTGAAGGGG
CTACCTGGTCGCAAGGATATAATGCCTGTCAGAAGATTACCATTAACGAG
CGGCTGTCCTTGCTAACGGATGCCACTGAGGCTCAGGAGGAGATTCGAGA
GGCTGCCCTGGGCATATCATCATTTATTGATCAGTGTTTGGTCCTGACGG
AGGCCGTGGACTTTTTCAACTGCTTTGCCAAAATGGCTAAGTTACAGTTG
GCGAATGTCTACAGTATATCATTTAATGCCACCGAGCAGGCTTTAATCCT
AAATAATAAATTAAGTAGAATCGAATTGGAGCACTATCGCTGCACAAATC
AAACCGAACAAAATTATGTCAAAAGGAACCAATACAATCTTTCGATCTTT
GGATCAGTGTCTGCAGCAAAATGATACACACGCAAGCTTTCTAGACCAT
FMO11509.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34005-RC | 633 | CG34005-RC | 52..582 | 1..531 | 2595 | 99.4 | Plus |
| CG34005-RB | 694 | CG34005-RB | 52..582 | 1..531 | 2595 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18048222..18048547 | 12..336 | 1580 | 99.7 | Plus |
| 2R | 25286936 | 2R | 18048602..18048797 | 335..531 | 920 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:40:57 has no hits.
FMO11509.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:58:59 Download gff for
FMO11509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 48..584 | 1..539 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:11 Download gff for
FMO11509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 52..588 | 1..539 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:05 Download gff for
FMO11509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 52..588 | 1..539 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:05 Download gff for
FMO11509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18048222..18048546 | 12..335 | 99 | -> | Plus |
| 2R | 18048603..18048800 | 336..536 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:11 Download gff for
FMO11509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13935727..13936051 | 12..335 | 99 | -> | Plus |
| arm_2R | 13936108..13936305 | 336..536 | 97 | -> | Plus |
