Clone FMO11513 Report

Search the DGRC for FMO11513

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:13
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14764-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11513.5prime Sequence

326 bp (326 high quality bases) assembled on 2012-05-14

> FMO11513.5prime
CAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCGGAGTGATA
ATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAGCCGAACGA
TTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAAAGAGTTCC
AGCGAGGAGCGCGGGCTTTATCAATGCGCTTGCACAGCGATTACTCGTAT
TCCATATTTACCTGTGTGAGGAGTAAACAGGCGCTATTGATTGCCTATAG
CCATCGGTTCAATGTCGCACCGCCACTCACATGCAGAGCAATGCAATTAA
ACTGTAGCGCAAGCTTTCTAGACCAT

FMO11513.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RB 1293 CG14764-RB 836..1136 8..308 1505 100 Plus
CG14764-RC 2272 CG14764-RC 366..510 8..152 725 100 Plus
CG14764-RA 2742 CG14764-RA 836..980 8..152 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7951886..7952044 308..150 795 100 Minus
2R 25286936 2R 7953902..7954046 152..8 725 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:41:09 has no hits.

FMO11513.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:01 Download gff for FMO11513.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 819..1130 1..312 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:18 Download gff for FMO11513.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 829..1140 1..312 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:11 Download gff for FMO11513.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 829..1140 1..312 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:11 Download gff for FMO11513.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7951882..7952041 153..312 98 <- Minus
2R 7953902..7954050 1..152 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:18 Download gff for FMO11513.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3839387..3839546 153..312 98 <- Minus
arm_2R 3841407..3841555 1..152 97   Minus