FMO11514.5prime Sequence
314 bp (314 high quality bases) assembled on 2012-05-14
> FMO11514.5prime
CAGTCGACATGGAATGCGAAGCTGCGGAGGGACGCGATTCGAGCGAGGCA
GATGAAGAAGATGTTAGCCCAAGCGGATGCAGAAGTAAAGTACGAAGAGG
ACAAGGGTCCATGACCAGGACCAGTCTGGACTGGAGGCGCTGCCATGGAT
CGGGAGGAGGTCGAGGAGCAGCAGGGCGATGGGAATTCGAGAAGGGGCAG
CATCATCAGCAACAGCAGCATAAACAAAACGACCATCAAAGCCGCAGGAA
CGGAAGAACCATACACTGGACGAAATCAAACCAAAGTAAGGAAGGAGCAA
GCTTTCTAGACCAT
FMO11514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 02:41:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18946718..18947005 | 9..296 | 1425 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 02:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2290..2416 | 137..261 | 170 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2468 | 190..300 | 165 | 65.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2256..2416 | 145..299 | 158 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6870 | 167..261 | 148 | 64.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1086..1161 | 164..238 | 142 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2779..2858 | 184..262 | 136 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6859 | 193..300 | 134 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6841 | 193..300 | 132 | 60.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1083..1176 | 193..284 | 131 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2490..2539 | 198..246 | 130 | 76 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1092..1155 | 190..252 | 128 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2445 | 197..251 | 124 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6843 | 193..261 | 124 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2888 | 198..279 | 119 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6894 | 199..261 | 119 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6797 | 185..259 | 118 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6855 | 198..261 | 117 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..6912 | 164..238 | 116 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6819 | 198..261 | 115 | 66.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1558..1609 | 193..243 | 113 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6849..6897 | 190..238 | 110 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2392 | 193..261 | 106 | 63.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2633..2665 | 197..229 | 102 | 78.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..2832 | 205..251 | 102 | 70.8 | Plus |
FMO11514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:01 Download gff for
FMO11514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42848-RA | 408..709 | 1..304 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:12 Download gff for
FMO11514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946712..18947013 | 1..304 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:12 Download gff for
FMO11514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946712..18947013 | 1..304 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:20 Download gff for
FMO11514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18946712..18947013 | 1..304 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:20 Download gff for
FMO11514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18946712..18947013 | 1..304 | 97 | | Plus |