FMO11515.5prime Sequence
508 bp (507 high quality bases) assembled on 2012-05-14
> FMO11515.5prime
CACTCGACATGAAGATCCGCAAGAATCATGCTCGCAAGCGTTATCGCTAC
AATGTAAACCGCAAGACGATGAATAAAACCCGGAGTTCCACCGGAAAAAT
TAAGGATCCCAGGATGAAAAAGATGTGGATGGAGGACCAGCGTGTGGGCA
CCAACTTCAGTGAAATGGGGTTGGCCAAGGACGTCAACAAGGCCATTGCG
ATTCCCAGCTACAAGAAGGACCGCCTCCTAGCGGCCCGAGTTGTGAATGG
GTTTCTGGAGGAGGAGCTGGACGAGGATGAGCGGCGTGTATTGGGCCTCA
AGAAACCAGTCGTAGAGGAGGGTCCAAAACGTGGACACGTAGTCCAGGAA
CTAGAACAACTGGCTAGCGAGCGAGCCGACCCAGAGTTCAGATTACCCAA
GGGCGTGGTCAAGGAACTGTCCTACTTTCTTAACAAACATAAGTTTAACT
ACAAGGCGATGGTTGCCGATCGGAAAAACTTTGGCCAGTGGACGTGGCGG
CAGTTCCG
FMO11515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11563-RA | 831 | CG11563-RA | 108..607 | 9..508 | 2500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31737316..31737600 | 107..391 | 1425 | 100 | Plus |
| 3R | 32079331 | 3R | 31737656..31737775 | 389..508 | 600 | 100 | Plus |
| 3R | 32079331 | 3R | 31737142..31737239 | 9..106 | 490 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 4564..4627 | 53..117 | 106 | 64.6 | Plus |
FMO11515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:02 Download gff for
FMO11515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 109..617 | 1..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:21 Download gff for
FMO11515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 99..607 | 1..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:13 Download gff for
FMO11515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 99..607 | 1..508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:13 Download gff for
FMO11515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31737133..31737239 | 1..106 | 97 | -> | Plus |
| 3R | 31737316..31737600 | 107..391 | 100 | -> | Plus |
| 3R | 31737659..31737775 | 392..508 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:21 Download gff for
FMO11515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27563381..27563497 | 392..508 | 100 | | Plus |
| arm_3R | 27562855..27562961 | 1..106 | 97 | -> | Plus |
| arm_3R | 27563038..27563322 | 107..391 | 100 | -> | Plus |
