Clone FMO11518 Report

Search the DGRC for FMO11518

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:18
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17977-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11518.5prime Sequence

302 bp (302 high quality bases) assembled on 2012-05-14

> FMO11518.5prime
CAGTCGACATGACTTTTGCAAGGTGGAACTGGACTATTTTCCCGTGTATG
ATCCCGACGAGCTTTCCAATCTGGATGCGAATCTTTCAAAGCCGGGCAAT
AGCACAAAACGCTCATATTATTCACCGCATCCTGAGGCCAGAAGGTCGAA
TAGAACCGCTGAAAAACAATTTGTCAAAGATGTTCAACTACGATATTCTC
ATGGCTTACAACTGCGACGGTGAGCTCTCAGTCAGCAGTCAGTCATCTCA
TACAAATATATTAACGAAACTATTTTTGGGGTCCGCAAGCTTTCTAGACC
AT

FMO11518.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG17977-RA 966 CG17977-RA 212..487 9..284 1380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8067125..8067293 279..111 845 100 Minus
2R 25286936 2R 8067342..8067444 111..9 515 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:41:28 has no hits.

FMO11518.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:03 Download gff for FMO11518.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17977-RA 209..488 9..288 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:25 Download gff for FMO11518.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17977-RA 212..491 9..288 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:16 Download gff for FMO11518.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17977-RA 212..491 9..288 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:16 Download gff for FMO11518.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8067125..8067293 111..279 100 <- Minus
2R 8067343..8067444 9..110 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:25 Download gff for FMO11518.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3954630..3954798 111..279 100 <- Minus
arm_2R 3954848..3954949 9..110 100   Minus